RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 FAM133AQ8N9E0 248 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 IL27Q8NEV9 243 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 PANK1Q8TE04 598 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 FAM122AQ96E09 287 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 SLC24A3Q9HC58 644 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 FAM217BQ9NTX9 383 aaPredicted RBP6.36□□□□□ -1.39
VAPA-207ENST00000583879 FEM1BQ9UK73 627 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 SYNPO2Q9UMS6 1093 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 YBX2Q9Y2T7 364 aaKnown RBP6.36□□□□□ -1.39
VAPA-207ENST00000583879 Q9Y3F1 56 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 MYH1P12882 1939 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 CDK5RAP2Q96SN8 1893 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 ASTN1O14525 1302 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 UMODL1Q5DID0 1318 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 IGKV6D-41A0A0C4DH26 115 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 ASB14A6NK59 587 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 ZEB2O60315 1214 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 TTLL1O95922 423 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 BMP3P12645 472 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 MYOGP15173 224 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 POU3F3P20264 500 aaPredicted RBP6.35□□□□□ -1.39
VAPA-207ENST00000583879 RABGGTBP53611 331 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 FSCN1Q16658 493 aaKnown RBP6.35□□□□□ -1.39
VAPA-207ENST00000583879 AAK1Q2M2I8 961 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 SLFN13Q68D06 897 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 GMCL1P1Q8NEA9 526 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 CEP95Q96GE4 821 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 C1QTNF1Q9BXJ1 281 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 AP5M1Q9H0R1 490 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 TRPV6Q9H1D0 765 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 ZNF287Q9HBT7 754 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 MTMR4Q9NYA4 1195 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 PCDHA11Q9Y5I1 949 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 SLC4A7Q9Y6M7 1214 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 A0A0G2JMZ2 1700 aa6.35□□□□□ -1.39
VAPA-207ENST00000583879 MYO5AQ9Y4I1 1855 aaKnown RBP6.34□□□□□ -1.39
VAPA-207ENST00000583879 ZNF536O15090 1300 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 TMEM232C9JQI7 657 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 ERC2O15083 957 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 B4GALT4O60513 344 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 PRDM1O75626 825 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 SUPT20HL2P0C7V6 817 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 CCNYL3P0C7X3 344 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 MS4A1P11836 297 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 ATP2A2P16615 1042 aaKnown RBP6.34□□□□□ -1.39
VAPA-207ENST00000583879 SSTR3P32745 418 aaPredicted RBP6.34□□□□□ -1.39
VAPA-207ENST00000583879 TFF2Q03403 129 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 TKFCQ3LXA3 575 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 TMEM67Q5HYA8 995 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 PPP2R2DQ66LE6 453 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 TAPT1Q6NXT6 567 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 TLK2Q86UE8 772 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 NEDD1Q8NHV4 660 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 CHURC1Q8WUH1 139 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 STAG1Q8WVM7 1258 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 OSBP2Q969R2 916 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 VWCEQ96DN2 955 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 SCLYQ96I15 445 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 AGBL1Q96MI9 1066 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 NECAB3Q96P71 396 aaPredicted RBP6.34□□□□□ -1.39
VAPA-207ENST00000583879 TRERF1Q96PN7 1200 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 NOC4LQ9BVI4 516 aaKnown RBP6.34□□□□□ -1.39
VAPA-207ENST00000583879 WNT8AQ9H1J5 351 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 ACAD9Q9H845 621 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 A1CFQ9NQ94 594 aaKnown RBP6.34□□□□□ -1.39
VAPA-207ENST00000583879 PDGFCQ9NRA1 345 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 HOMER2Q9NSB8 354 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 ZBTB40Q9NUA8 1239 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 COG6Q9Y2V7 657 aa6.34□□□□□ -1.39
VAPA-207ENST00000583879 SMCHD1A6NHR9 2005 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 ZBBXA8MT70 800 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 PATL2C9JE40 543 aaKnown RBP6.33□□□□□ -1.4
VAPA-207ENST00000583879 RFXAPO00287 272 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 RNF113AO15541 343 aaKnown RBP6.33□□□□□ -1.4
VAPA-207ENST00000583879 PLA2G6O60733 806 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 APPP05067 770 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 PFKMP08237 780 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 GNAT2P19087 354 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 PTGS1P23219 599 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 MCCP23508 829 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 KCNQ1P51787 676 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 STAT2P52630 851 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 PSMC6P62333 389 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 TFAP4Q01664 338 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 PDE4DQ08499 809 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 TTLL4Q14679 1199 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 SKIV2LQ15477 1246 aaKnown RBP6.33□□□□□ -1.4
VAPA-207ENST00000583879 TMEM63BQ5T3F8 832 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 RCSD1Q6JBY9 416 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 MRPL14Q6P1L8 145 aaKnown RBP6.33□□□□□ -1.4
VAPA-207ENST00000583879 KIAA1211Q6ZU35 1233 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 EEPD1Q7L9B9 569 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 FAM160B2Q86V87 743 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 LRRC47Q8N1G4 583 aaKnown RBP6.33□□□□□ -1.4
VAPA-207ENST00000583879 MICALL1Q8N3F8 863 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 KBTBD3Q8NAB2 608 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 PHOSPHO2Q8TCD6 241 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 APPBP2Q92624 585 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 GMCL1Q96IK5 515 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 ALDH8A1Q9H2A2 487 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms