RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 NKX3-2P78367 333 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 TNFAIP2Q03169 654 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 PDE4BQ07343 736 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 PPARAQ07869 468 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 MUM1L1Q5H9M0 696 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 CCDC174Q6PII3 467 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 EEPD1Q7L9B9 569 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 ZNF598Q86UK7 904 aaKnown RBP9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 FAM160B2Q86V87 743 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 FBXO16Q8IX29 292 aaPredicted RBP9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 STAG1Q8WVM7 1258 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 NAPBQ9H115 298 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 DCTPP1Q9H773 170 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 PRM3Q9NNZ6 103 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 IL23AQ9NPF7 189 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 PDGFCQ9NRA1 345 aa9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 CXXC1Q9P0U4 656 aaPredicted RBP9.24□□□□□ -0.93
SMCHD1-210ENST00000583800 ASB14A6NK59 587 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 NMT2O60551 498 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 FDX1P10109 184 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 SMPD1P17405 629 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 CCL23P55773 120 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 PSMC6P62333 389 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 CTDSPL2Q05D32 466 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 ITGA7Q13683 1181 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 ADGRE1Q14246 886 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 FSCN1Q16658 493 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 TUSC1Q2TAM9 212 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 TMEM63BQ5T3F8 832 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 KCTD1Q719H9 257 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 SLC43A3Q8NBI5 491 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 PI4K2BQ8TCG2 481 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 OTUD7AQ8TE49 926 aaPredicted RBP9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 CHURC1Q8WUH1 139 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 HERVK_113Q902F9 699 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 TRERF1Q96PN7 1200 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 FSD1Q9BTV5 496 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 NACAP1Q9BZK3 213 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 NKX2-4Q9H2Z4 354 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 HIPK3Q9H422 1215 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 INCENPQ9NQS7 918 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 PRR12Q9ULL5 1215 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 STX8Q9UNK0 236 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 PCDHB3Q9Y5E6 796 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 GRIN2DO15399 1336 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 MUC3AQ02505 3323 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 TRIP12Q14669 1992 aaPredicted RBP9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 SCN10AQ9Y5Y9 1956 aa9.23□□□□□ -0.93
SMCHD1-210ENST00000583800 TSPY2A6NKD2 308 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 FOXP2O15409 715 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 DYNC1LI2O43237 492 aaPredicted RBP9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 B4GALT4O60513 344 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 CABYRO75952 493 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 FGBP02675 491 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 RAB30Q15771 203 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 CCDC85BQ15834 202 aaPredicted RBP9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 LRRFIP1Q32MZ4 808 aaKnown RBP9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 TKFCQ3LXA3 575 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 ZMYM1Q5SVZ6 1142 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 TAPT1Q6NXT6 567 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 NSMFQ6X4W1 530 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 OTOP2Q7RTS6 562 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 NOC4LQ9BVI4 516 aaKnown RBP9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 AP5M1Q9H0R1 490 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 TRPV6Q9H1D0 765 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 WNT8AQ9H1J5 351 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 IL17RBQ9NRM6 502 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 CYP39A1Q9NYL5 469 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 THEGQ9P2T0 379 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 MSRAQ9UJ68 235 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 YBX2Q9Y2T7 364 aaKnown RBP9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 CHD9Q3L8U1 2897 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 MYH6P13533 1939 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 PTPRSQ13332 1948 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 NCOR1O75376 2440 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 TET1Q8NFU7 2136 aa9.22□□□□□ -0.93
SMCHD1-210ENST00000583800 TNFRSF10AO00220 468 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 ZEB2O60315 1214 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 IGFBP4P22692 258 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 RABGGTBP53611 331 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 CCDC96Q2M329 555 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 AKNAD1Q5T1N1 836 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 RCSD1Q6JBY9 416 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 BLOC1S3Q6QNY0 202 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 SCLYQ96I15 445 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 MTIF3Q9H2K0 278 aaKnown RBP9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 CHD7Q9P2D1 2997 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 CCPG1Q9ULG6 757 aa9.21□□□□□ -0.94
SMCHD1-210ENST00000583800 PRRC2BQ5JSZ5 2229 aaKnown RBP9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 COL4A4P53420 1690 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 ZBBXA8MT70 800 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 ERC2O15083 957 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 RANBP6O60518 1105 aaKnown RBP9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 PLA2G6O60733 806 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms