RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 LEXMQ3ZCV2 418 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 IER5LQ5T953 404 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 CCSAPQ6IQ19 270 aaPredicted RBP11.33□□□□□ -0.6
MKS1-212ENST00000583577 SPRED2Q7Z698 418 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 RPUSD2Q8IZ73 545 aaKnown RBP11.33□□□□□ -0.6
MKS1-212ENST00000583577 ABRAQ8N0Z2 381 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 FBXL16Q8N461 479 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 ACER1Q8TDN7 264 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 MROH8Q9H579 483 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 ATRXP46100 2492 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 PKD1L2Q7Z442 2459 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 SPTBN2O15020 2390 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 PTPRSQ13332 1948 aa11.33□□□□□ -0.6
MKS1-212ENST00000583577 PARP14Q460N5 1801 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 TRIP12Q14669 1992 aaPredicted RBP11.32□□□□□ -0.6
MKS1-212ENST00000583577 ZNF213O14771 459 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 FIBPO43427 364 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 LPXNO60711 386 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 CD4P01730 458 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 CDC25BP30305 580 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 CTDSPL2Q05D32 466 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 COG2Q14746 738 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 SYCP1Q15431 976 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 ME3Q16798 604 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
MKS1-212ENST00000583577 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
MKS1-212ENST00000583577 ZNF444Q8N0Y2 327 aaPredicted RBP11.32□□□□□ -0.6
MKS1-212ENST00000583577 PCSK9Q8NBP7 692 aaKnown RBP11.32□□□□□ -0.6
MKS1-212ENST00000583577 GDPD5Q8WTR4 605 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 FOXD4L4Q8WXT5 416 aaPredicted RBP11.32□□□□□ -0.6
MKS1-212ENST00000583577 SCLYQ96I15 445 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 MMP19Q99542 508 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 WNT8AQ9H1J5 351 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 HOXC10Q9NYD6 342 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 FAM184BQ9ULE4 1060 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 EP300Q09472 2414 aaPredicted RBP11.32□□□□□ -0.6
MKS1-212ENST00000583577 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 PLXNA3P51805 1871 aa11.32□□□□□ -0.6
MKS1-212ENST00000583577 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
MKS1-212ENST00000583577 AKR1B1P15121 316 aa11.31□□□□□ -0.6
MKS1-212ENST00000583577 RASA1P20936 1047 aa11.31□□□□□ -0.6
MKS1-212ENST00000583577 HAND2P61296 217 aa11.31□□□□□ -0.6
MKS1-212ENST00000583577 DNM1Q05193 864 aaKnown RBP11.31□□□□□ -0.6
MKS1-212ENST00000583577 SEPT2Q15019 361 aa11.31□□□□□ -0.6
MKS1-212ENST00000583577 IMMTQ16891 758 aaKnown RBP11.31□□□□□ -0.6
MKS1-212ENST00000583577 TOMM22Q9NS69 142 aa11.31□□□□□ -0.6
MKS1-212ENST00000583577 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
MKS1-212ENST00000583577 TPCN1Q9ULQ1 816 aa11.31□□□□□ -0.6
MKS1-212ENST00000583577 KMT2EQ8IZD2 1858 aa11.31□□□□□ -0.6
MKS1-212ENST00000583577 VPS37CA5D8V6 355 aaPredicted RBP11.3□□□□□ -0.6
MKS1-212ENST00000583577 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 PRDM1O75626 825 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 KRT37O76014 449 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 ADCK5Q3MIX3 580 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 ERMP1Q7Z2K6 904 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 DEFB128Q7Z7B8 93 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 KIAA1524Q8TCG1 905 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 SPATA32Q96LK8 384 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
MKS1-212ENST00000583577 TNMDQ9H2S6 317 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 CLSTN2Q9H4D0 955 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 RNF41Q9H4P4 317 aaPredicted RBP11.3□□□□□ -0.6
MKS1-212ENST00000583577 SPC25Q9HBM1 224 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 SIP14410 1827 aa11.3□□□□□ -0.6
MKS1-212ENST00000583577 TSPY2A6NKD2 308 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 KIF28PB7ZC32 967 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 ORC4O43929 436 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
MKS1-212ENST00000583577 TUBB4AP04350 444 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 TSPY3P0CV98 308 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 TSPY8P0CW00 308 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 PCP11498 1178 aaKnown RBP11.29□□□□□ -0.6
MKS1-212ENST00000583577 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
MKS1-212ENST00000583577 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 ICA1Q05084 483 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 TCF15Q12870 199 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 ZNF792Q3KQV3 632 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 DNTTIP2Q5QJE6 756 aaKnown RBP11.29□□□□□ -0.6
MKS1-212ENST00000583577 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 MFSD6Q6ZSS7 791 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 SMARCC2Q8TAQ2 1214 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 VWCEQ96DN2 955 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
MKS1-212ENST00000583577 AGXT2Q9BYV1 514 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 SH2D4AQ9H788 454 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 KANSL2Q9H9L4 492 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 GDPD2Q9HCC8 539 aa11.29□□□□□ -0.6
MKS1-212ENST00000583577 LMCD1Q9NZU5 365 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms