RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PTPAQ15257 358 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 ZNF792Q3KQV3 632 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 MORN1Q5T089 497 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PPP4R3AQ6IN85 833 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 MOXD1Q6UVY6 613 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 MBOAT7Q96N66 472 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 IWS1Q96ST2 819 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 NAP1L4Q99733 375 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 PDCD2LQ9BRP1 358 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 TCHHQ07283 1943 aa18.59■□□□□ 0.57
CDK5RAP3-228ENST00000583363 NR3C2P08235 984 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 NCLP19338 710 aaKnown RBP18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 EIF2AK2P19525 551 aaKnown RBP18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 CTGFP29279 349 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 UBXN2AP68543 259 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ORC2Q13416 577 aaPredicted RBP18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PGM5Q15124 567 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PCNX4Q63HM2 1172 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 XRRA1Q6P2D8 792 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 VSIG10LQ86VR7 867 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 C4orf32Q8N8J7 132 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 LINC00301Q8NCQ3 95 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 FGD4Q96M96 766 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 GBP4Q96PP9 640 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 SCAND2PQ9GZW5 306 aaPredicted RBP18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ADD3Q9UEY8 706 aaKnown RBP18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MYH7BA7E2Y1 1941 aa18.58■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ASTN1O14525 1302 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ECM2O94769 699 aaPredicted RBP18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 TDP2O95551 362 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 YEATS4O95619 227 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 GCFC2P16383 781 aaKnown RBP18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MCM7P33993 719 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ZNF76P36508 570 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ALDH5A1P51649 535 aaPredicted RBP18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 KIF22Q14807 665 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 SLC39A14Q15043 492 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 IL31RAQ8NI17 732 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 GJD2Q9UKL4 321 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 CEP131Q9UPN4 1083 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 COLQQ9Y215 455 aaPredicted RBP18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 DIS3Q9Y2L1 958 aaKnown RBP18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 CEP290O15078 2479 aa18.57■□□□□ 0.56
CDK5RAP3-228ENST00000583363 LOC102724159A0A0B4J2E5 919 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 BMP15O95972 392 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MYCLP12524 364 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PSMC4P43686 418 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 FCGRTP55899 365 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MRPS9P82933 396 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 STK38Q15208 465 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PWP2Q15269 919 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 Q4G0T1 1027 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 DPP9Q86TI2 863 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 LEO1Q8WVC0 666 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 USP6NLQ92738 828 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 GDPD2Q9HCC8 539 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 UBIAD1Q9Y5Z9 338 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MORC2Q9Y6X9 1032 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 DOCK3Q8IZD9 2030 aa18.56■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MYH15Q9Y2K3 1946 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 B4DLN1 442 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 FAM86B1E9PN63 330 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MEIS1O00470 390 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 TNPO2O14787 897 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 GNRH1P01148 92 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 FAM86B2P0C5J1 330 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 EDNRBP24530 442 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 CCND2P30279 289 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MAP2K5Q13163 448 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PTGDRQ13258 359 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 CEP55Q53EZ4 464 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ZNF467Q7Z7K2 595 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 CYP2W1Q8TAV3 490 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MORC4Q8TE76 937 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ZFP91Q96JP5 570 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 SPATA32Q96LK8 384 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 NUDT12Q9BQG2 462 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MXRA8Q9BRK3 442 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 TMEM60Q9H2L4 133 aa18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 DDX25Q9UHL0 483 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP3-228ENST00000583363 IGLV3-22A0A075B6J6 115 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 SPTLC2O15270 562 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 FIBPO43427 364 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 SLC37A4O43826 429 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PRMT2P55345 433 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ATP2C1P98194 919 aaPredicted RBP18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MTFR1Q15390 333 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 NIPA1Q7RTP0 329 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 LENG9Q96B70 501 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 TRIM47Q96LD4 638 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MTMR9Q96QG7 549 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 JADE2Q9NQC1 790 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 SLC5A4Q9NY91 659 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 LCTP09848 1927 aa18.54■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ASB14A6NK59 587 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 H0YGN5 161 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 NEMFO60524 1076 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PPP6R2O75170 966 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 EIF3JO75822 258 aaKnown RBP18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 STAM2O75886 525 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms