RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ZC3H7AQ8IWR0 971 aaKnown RBP8□□□□□ -1.13
SMARCE1-219ENST00000583294 TRMT2BQ96GJ1 504 aaKnown RBP8□□□□□ -1.13
SMARCE1-219ENST00000583294 KCNJ15Q99712 375 aa8□□□□□ -1.13
SMARCE1-219ENST00000583294 MTA3Q9BTC8 594 aa8□□□□□ -1.13
SMARCE1-219ENST00000583294 JAM3Q9BX67 310 aa8□□□□□ -1.13
SMARCE1-219ENST00000583294 IPPKQ9H8X2 491 aa8□□□□□ -1.13
SMARCE1-219ENST00000583294 MAGEC2Q9UBF1 373 aaPredicted RBP8□□□□□ -1.13
SMARCE1-219ENST00000583294 FBLN5Q9UBX5 448 aa8□□□□□ -1.13
SMARCE1-219ENST00000583294 ACSL6Q9UKU0 697 aa8□□□□□ -1.13
SMARCE1-219ENST00000583294 NAT1P18440 290 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 CYP4F8P98187 520 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 PAK1Q13153 545 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 NLRX1Q86UT6 975 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 LRRTM3Q86VH5 581 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 LILRA2Q8N149 483 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 NLGN2Q8NFZ4 835 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 PCDH19Q8TAB3 1148 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 ABHD4Q8TB40 342 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 PDLIM7Q9NR12 457 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 IFT57Q9NWB7 429 aa7.99□□□□□ -1.13
SMARCE1-219ENST00000583294 DNAJC6O75061 913 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 ASLP04424 464 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 GRK2P25098 689 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 GRK3P35626 688 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 IGFALSP35858 605 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 AFMP43652 599 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 BICRALQ6AI39 1079 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 PLEKHO2Q8TD55 490 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 SHISA4Q96DD7 197 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 TARS2Q9BW92 718 aaKnown RBP7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 RNF32Q9H0A6 362 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 SPC25Q9HBM1 224 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 COQ6Q9Y2Z9 468 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 PRKAB1Q9Y478 270 aa7.98□□□□□ -1.13
SMARCE1-219ENST00000583294 A0A087X0B3 334 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 FAM47E-STBD1D6RA91 191 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 ARVCFO00192 962 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 PDE8AO60658 829 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 JMJD7P0C870 316 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 SDHBP21912 280 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 DNM2P50570 870 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 NEK4P51957 841 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 CORO7P57737 925 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 JAG1P78504 1218 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 ABHD17CQ6PCB6 329 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 UBR7Q8N806 425 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 KIRREL1Q96J84 757 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 INTS7Q9NVH2 962 aaKnown RBP7.97□□□□□ -1.13
SMARCE1-219ENST00000583294 H7BY64 318 aa7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 COL6A2P12110 1019 aa7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 KCNA6P17658 529 aa7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 ZNF124Q15973 351 aa7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 FLAD1Q8NFF5 587 aa7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 DDX1Q92499 740 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 RXFP1Q9HBX9 757 aa7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 SAMD15Q9P1V8 674 aa7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 COA3Q9Y2R0 106 aaPredicted RBP7.96□□□□□ -1.14
SMARCE1-219ENST00000583294 KPNA6O60684 536 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 NTRK1P04629 796 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 PYGMP11217 842 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 PNLIPP16233 465 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 ST5P78524 1137 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 SNX17Q15036 470 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 CFAP100Q494V2 611 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 THNSL2Q86YJ6 484 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 IGSF22Q8N9C0 903 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 FBXW5Q969U6 566 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 CATSPERZQ9NTU4 200 aa7.95□□□□□ -1.14
SMARCE1-219ENST00000583294 FAM83GA6ND36 823 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 GSG1L2A8MUP6 293 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 B4E1Z4 1266 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 FARP2O94887 1054 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 CKMP06732 381 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 CNGA1P29973 690 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 FLT3P36888 993 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 ARL4AP40617 200 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 PCBP1Q15365 356 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 PIK3R6Q5UE93 754 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 CDCA2Q69YH5 1023 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 ZCCHC8Q6NZY4 707 aaKnown RBP7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 UBE2R2Q712K3 238 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 DDX53Q86TM3 631 aaKnown RBP7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 CABP7Q86V35 215 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 LEO1Q8WVC0 666 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 CRTAC1Q9NQ79 661 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 X6R8D5 127 aa7.94□□□□□ -1.14
SMARCE1-219ENST00000583294 CCDC66A2RUB6 948 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 DGKIO75912 1065 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 GLRX3O76003 335 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 GNAT1P11488 350 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 NCLP19338 710 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 FAM47CQ5HY64 1035 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 WWC2Q6AWC2 1192 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 Q8N1Y9 231 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 CISD2Q8N5K1 135 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 CHAC2Q8WUX2 184 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 WNK4Q96J92 1243 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 EPB41L1Q9H4G0 881 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms