RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 CAGE1Q8TC20 777 aa7.23□□□□□ -1.25
CDK12-207ENST00000581963 AFG1LQ8WV93 481 aa7.23□□□□□ -1.25
CDK12-207ENST00000581963 UBE2ZQ9H832 354 aaPredicted RBP7.23□□□□□ -1.25
CDK12-207ENST00000581963 SUGCTQ9HAC7 445 aa7.23□□□□□ -1.25
CDK12-207ENST00000581963 LMCD1Q9NZU5 365 aa7.23□□□□□ -1.25
CDK12-207ENST00000581963 NOD1Q9Y239 953 aa7.23□□□□□ -1.25
CDK12-207ENST00000581963 COL4A6Q14031 1691 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 ZDBF2Q9HCK1 2354 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 SNHG28P0DPA3 235 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 CKBP12277 381 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 IL9P15248 144 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 ZNF543Q08ER8 600 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 MBTPS1Q14703 1052 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 LY6KQ17RY6 165 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 TRIM71Q2Q1W2 868 aaKnown RBP7.22□□□□□ -1.25
CDK12-207ENST00000581963 TRAF7Q6Q0C0 670 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 LRRC8DQ7L1W4 858 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 FAM178BQ8IXR5 827 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 WNT8BQ93098 351 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 TGS1Q96RS0 853 aaKnown RBP7.22□□□□□ -1.25
CDK12-207ENST00000581963 MPHOSPH6Q99547 160 aaKnown RBP7.22□□□□□ -1.25
CDK12-207ENST00000581963 ZBED2Q9BTP6 218 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 TCP11L1Q9NUJ3 509 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 COL20A1Q9P218 1284 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 GTF2IRD1Q9UHL9 959 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 RCAN3Q9UKA8 241 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 SALL3Q9BXA9 1300 aa7.22□□□□□ -1.25
CDK12-207ENST00000581963 PRR33A8MZF0 331 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 GH1P01241 217 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 MX1P20591 662 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 KCNA5P22460 613 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 MKRN4PQ13434 485 aaPredicted RBP7.21□□□□□ -1.26
CDK12-207ENST00000581963 ALX1Q15699 326 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 LEXMQ3ZCV2 418 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 USH1GQ495M9 461 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 RRP12Q5JTH9 1297 aaKnown RBP7.21□□□□□ -1.26
CDK12-207ENST00000581963 FAM117BQ6P1L5 589 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 SEPT14Q6ZU15 432 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 CHST3Q7LGC8 479 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 ALYREFQ86V81 257 aaKnown RBP7.21□□□□□ -1.26
CDK12-207ENST00000581963 GJD3Q8N144 294 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 RGS22Q8NE09 1264 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.21□□□□□ -1.26
CDK12-207ENST00000581963 TBC1D5Q92609 795 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 TAAR1Q96RJ0 339 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 RAD9AQ99638 391 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 C17orf80Q9BSJ5 609 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 CPVLQ9H3G5 476 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 TOMM22Q9NS69 142 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 HDAC6Q9UBN7 1215 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 PNMA2Q9UL42 364 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 KMT2EQ8IZD2 1858 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 ZMYM6O95789 1325 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 USP34Q70CQ2 3546 aa7.21□□□□□ -1.26
CDK12-207ENST00000581963 CACNA1HO95180 2353 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 TTC3P53804 2025 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 A0A0D9SFI3 127 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 ABHD14A-ACY1A0A1B0GW23 586 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 HAS3O00219 553 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 PARNO95453 639 aaKnown RBP7.2□□□□□ -1.26
CDK12-207ENST00000581963 FGAP02671 866 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 ZNF286BP0CG31 522 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 GOLGA8HP0CJ92 632 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 CASTP20810 708 aaKnown RBP7.2□□□□□ -1.26
CDK12-207ENST00000581963 PSEN2P49810 448 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 HAND2P61296 217 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 ZNF200P98182 395 aaPredicted RBP7.2□□□□□ -1.26
CDK12-207ENST00000581963 HIC1Q14526 733 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 ZNF618Q5T7W0 954 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 PTCRAQ6ISU1 281 aaPredicted RBP7.2□□□□□ -1.26
CDK12-207ENST00000581963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDK12-207ENST00000581963 TBC1D10CQ8IV04 446 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 FBXO22Q8NEZ5 403 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 SP7Q8TDD2 431 aaPredicted RBP7.2□□□□□ -1.26
CDK12-207ENST00000581963 SYTL5Q8TDW5 730 aaPredicted RBP7.2□□□□□ -1.26
CDK12-207ENST00000581963 ALG1Q9BT22 464 aa7.2□□□□□ -1.26
CDK12-207ENST00000581963 DDX41Q9UJV9 622 aaKnown RBP7.2□□□□□ -1.26
CDK12-207ENST00000581963 GRXCR2A6NFK2 248 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 B4DLN1 442 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 EFCAB14O75071 495 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 LGR5O75473 907 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 F2P00734 622 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 HSPD1P10809 573 aaKnown RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 HOXD8P13378 290 aaPredicted RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 SSTR3P32745 418 aaPredicted RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 MRPL12P52815 198 aaKnown RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 HTRA4P83105 476 aaPredicted RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 PTK7Q13308 1070 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 IKBKEQ14164 716 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 MFSD10Q14728 455 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 CDC37Q16543 378 aaPredicted RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 DGKDQ16760 1214 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 KIAA0753Q2KHM9 967 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 ZNF589Q86UQ0 364 aaPredicted RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 C7orf31Q8N865 590 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 NEK9Q8TD19 979 aa7.19□□□□□ -1.26
CDK12-207ENST00000581963 NSUN6Q8TEA1 469 aaKnown RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 EMID1Q96A84 441 aaPredicted RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 MRPL38Q96DV4 380 aaKnown RBP7.19□□□□□ -1.26
CDK12-207ENST00000581963 FAM227BQ96M60 508 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms