RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 PPP1R12BO60237 982 aaPredicted RBP16.45■□□□□ 0.22
MKS1-211ENST00000581761 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
MKS1-211ENST00000581761 VCAM1P19320 739 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 ZNF76P36508 570 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 Q4G0T1 1027 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 CT47A1Q5JQC4 288 aaPredicted RBP16.45■□□□□ 0.22
MKS1-211ENST00000581761 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
MKS1-211ENST00000581761 KRT79Q5XKE5 535 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 ARMC9Q7Z3E5 817 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 SNX29Q8TEQ0 813 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 CRYGNQ8WXF5 182 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 BEGAINQ9BUH8 593 aa16.45■□□□□ 0.22
MKS1-211ENST00000581761 ZBED4O75132 1171 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 FLOT1O75955 427 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 MYL1P05976 194 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 TPM3P06753 285 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 CYP3A4P08684 503 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
MKS1-211ENST00000581761 BACE1P56817 501 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 GRB10Q13322 594 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 PRR16Q569H4 304 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.44■□□□□ 0.22
MKS1-211ENST00000581761 RASAL3Q86YV0 1011 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 SLFN12Q8IYM2 578 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 LRRC15Q8TF66 581 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 TBC1D5Q92609 795 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 GJA10Q969M2 543 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 MRFAP1L1Q96HT8 127 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 AGBL1Q96MI9 1066 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 PNMA5Q96PV4 448 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 KCNMB3Q9NPA1 279 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 PPP1R9AQ9ULJ8 1098 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 ZHX2Q9Y6X8 837 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 ZNF536O15090 1300 aa16.44■□□□□ 0.22
MKS1-211ENST00000581761 SLC10A3P09131 477 aa16.43■□□□□ 0.22
MKS1-211ENST00000581761 MSNP26038 577 aaKnown RBP16.43■□□□□ 0.22
MKS1-211ENST00000581761 ERCC5P28715 1186 aaPredicted RBP16.43■□□□□ 0.22
MKS1-211ENST00000581761 CIITAP33076 1130 aa16.43■□□□□ 0.22
MKS1-211ENST00000581761 LBX1P52954 281 aa16.43■□□□□ 0.22
MKS1-211ENST00000581761 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.22
MKS1-211ENST00000581761 ENOX1Q8TC92 643 aaKnown RBP16.43■□□□□ 0.22
MKS1-211ENST00000581761 UIMC1Q96RL1 719 aa16.43■□□□□ 0.22
MKS1-211ENST00000581761 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
MKS1-211ENST00000581761 RRAGDQ9NQL2 400 aaPredicted RBP16.43■□□□□ 0.22
MKS1-211ENST00000581761 KBTBD4Q9NVX7 518 aa16.43■□□□□ 0.22
MKS1-211ENST00000581761 STK17AQ9UEE5 414 aa16.43■□□□□ 0.22
MKS1-211ENST00000581761 PCDHA12Q9UN75 941 aa16.43■□□□□ 0.22
MKS1-211ENST00000581761 THSD7BQ9C0I4 1608 aa16.43■□□□□ 0.22
MKS1-211ENST00000581761 C19orf81C9J6K1 198 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 TBX3O15119 743 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 IREB2P48200 963 aaKnown RBP16.42■□□□□ 0.22
MKS1-211ENST00000581761 FANCCQ00597 558 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 AMPD3Q01432 767 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 NOGQ13253 232 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 TMEM119Q4V9L6 283 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
MKS1-211ENST00000581761 CPXCR1Q8N123 301 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 CCDC47Q96A33 483 aaKnown RBP16.42■□□□□ 0.22
MKS1-211ENST00000581761 C12orf42Q96LP6 360 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 SLC38A10Q9HBR0 1119 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 PNMA2Q9UL42 364 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 ZKSCAN5Q9Y2L8 839 aa16.42■□□□□ 0.22
MKS1-211ENST00000581761 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
MKS1-211ENST00000581761 PPP1R3GB7ZBB8 358 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 FAM86B1E9PN63 330 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 SLC26A4O43511 780 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 FAM86B2P0C5J1 330 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 FDX1P10109 184 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 ALAS1P13196 640 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 CD44P16070 742 aaKnown RBP16.41■□□□□ 0.22
MKS1-211ENST00000581761 CCT6AP40227 531 aaKnown RBP16.41■□□□□ 0.22
MKS1-211ENST00000581761 HMGCS2P54868 508 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 MAP3K9P80192 1104 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 DHX8Q14562 1220 aaKnown RBP16.41■□□□□ 0.22
MKS1-211ENST00000581761 KCNB1Q14721 858 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 KMT5BQ4FZB7 885 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 ZNF658Q5TYW1 1059 aaPredicted RBP16.41■□□□□ 0.22
MKS1-211ENST00000581761 KLHL10Q6JEL2 608 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 SV2BQ7L1I2 683 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 MCF2L2Q86YR7 1114 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 SMYD4Q8IYR2 804 aaPredicted RBP16.41■□□□□ 0.22
MKS1-211ENST00000581761 ETNPPLQ8TBG4 499 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 RAD54LQ92698 747 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 C7orf25Q9BPX7 421 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 NUDT12Q9BQG2 462 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 HSD3B7Q9H2F3 369 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 PRDM10Q9NQV6 1147 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 FANCLQ9NW38 375 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 TMOD4Q9NZQ9 345 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.41■□□□□ 0.22
MKS1-211ENST00000581761 CTNND2Q9UQB3 1225 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 SMCHD1A6NHR9 2005 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 KDM3AQ9Y4C1 1321 aa16.41■□□□□ 0.22
MKS1-211ENST00000581761 CBFA2T2O43439 604 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 KLRC4O43908 158 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms