RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CYP2C19P33261 490 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 HSD17B4P51659 736 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 RTP1P59025 263 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 PKN1Q16512 942 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 MFSD14CQ5VZR4 134 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 FAM184AQ8NB25 1140 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 NSUN7Q8NE18 718 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 MAML3Q96JK9 1138 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 LBHD1Q9BQE6 289 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 TTYH1Q9H313 450 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 SEMA6BQ9H3T3 888 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 PSTPIP2Q9H939 334 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 LCTP09848 1927 aa15.44■□□□□ 0.06
CSNK1D-220ENST00000581737 ASB14A6NK59 587 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 PIK3CDO00329 1044 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 OPLAHO14841 1288 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 BAG4O95429 457 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 CTDNEP1O95476 244 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 NCLP19338 710 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 CNGA1P29973 690 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 ADCY7P51828 1080 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 GJC2Q5T442 439 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 ZNF697Q5TEC3 545 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 ANO1Q5XXA6 986 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 DNERQ8NFT8 737 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 SYNGAP1Q96PV0 1343 aa15.43■□□□□ 0.06
CSNK1D-220ENST00000581737 PPFIA3O75145 1194 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 ZSCAN22P10073 491 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 GNA11P29992 359 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 CNTN2Q02246 1040 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 ST3GAL1Q11201 340 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 MCTP2Q6DN12 878 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 SMARCC2Q8TAQ2 1214 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 SYTL5Q8TDW5 730 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 MYLIPQ8WY64 445 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 TINF2Q9BSI4 451 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 EHMT1Q9H9B1 1298 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 C6orf50Q9HD87 102 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 RIC8AQ9NPQ8 531 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 ATP11BQ9Y2G3 1177 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 MCM3APO60318 1980 aa15.42■□□□□ 0.06
CSNK1D-220ENST00000581737 SMCO2A6NFE2 343 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 DNM1LO00429 736 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 LARP1BQ659C4 914 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 GALNT17Q6IS24 598 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 MAMDC4Q6UXC1 1216 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 SH3RF1Q7Z6J0 888 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 MAFAQ8NHW3 353 aaPredicted RBP15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 NSUN6Q8TEA1 469 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 BADQ92934 168 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 RMDN3Q96TC7 470 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 ALG1Q9BT22 464 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 ZMYND12Q9H0C1 365 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 NRBP1Q9UHY1 535 aa15.41■□□□□ 0.06
CSNK1D-220ENST00000581737 LTBP2Q14767 1821 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 FRMPD3Q5JV73 1810 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 SOWAHBA6NEL2 793 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 SPDYE3A6NKU9 549 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 JAK2O60674 1132 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 FOSP01100 380 aaPredicted RBP15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 CYBAP13498 195 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 SYT1P21579 422 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 ITGB8P26012 769 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 HOXA13P31271 388 aaPredicted RBP15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 ALDH5A1P51649 535 aaPredicted RBP15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 TRIM29Q14134 588 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 TRIM60Q495X7 471 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 ARHGEF16Q5VV41 709 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 TYW1BQ6NUM6 668 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 TBC1D5Q92609 795 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 FGD4Q96M96 766 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 IWS1Q96ST2 819 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 VPS54Q9P1Q0 977 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 CNPY2Q9Y2B0 182 aa15.4■□□□□ 0.06
CSNK1D-220ENST00000581737 VPS37CA5D8V6 355 aaPredicted RBP15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 TRIM43BA6NCK2 446 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 H3BQV1 296 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 MEIS2O14770 477 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 MBD3O95983 291 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 NLRP5P59047 1200 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 AP3B2Q13367 1082 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 PRAMEF19Q5SWL8 479 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 USP17L6PQ6QN14 398 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 SLC39A5Q6ZMH5 540 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 ARMCX2Q7L311 632 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 FCHSD1Q86WN1 690 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 REXO1Q8N1G1 1221 aaKnown RBP15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 TRIM43Q96BQ3 446 aaPredicted RBP15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 PRDM6Q9NQX0 595 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 PRDM5Q9NQX1 630 aaPredicted RBP15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 PXMP2Q9NR77 195 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 COL20A1Q9P218 1284 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 LRRC37A2A6NM11 1700 aa15.39■□□□□ 0.05
CSNK1D-220ENST00000581737 TRAK2O60296 914 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 F13A1P00488 732 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 FDPSP14324 419 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 EPHB4P54760 987 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 PDE4DQ08499 809 aa15.38■□□□□ 0.05
CSNK1D-220ENST00000581737 MCTP1Q6DN14 999 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms