RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 GRB10Q13322 594 aa7.58□□□□□ -1.2
SMCHD1-207ENST00000581711 MBLAC2Q68D91 279 aa7.58□□□□□ -1.2
SMCHD1-207ENST00000581711 ZNF585AQ6P3V2 769 aa7.58□□□□□ -1.2
SMCHD1-207ENST00000581711 ARHGEF39Q8N4T4 335 aa7.58□□□□□ -1.2
SMCHD1-207ENST00000581711 FGD4Q96M96 766 aa7.58□□□□□ -1.2
SMCHD1-207ENST00000581711 ZNF28P17035 718 aa7.57□□□□□ -1.2
SMCHD1-207ENST00000581711 PRAMEF18Q5VWM3 479 aa7.57□□□□□ -1.2
SMCHD1-207ENST00000581711 CIR1Q86X95 450 aaPredicted RBP7.57□□□□□ -1.2
SMCHD1-207ENST00000581711 PALM2Q8IXS6 379 aa7.57□□□□□ -1.2
SMCHD1-207ENST00000581711 DPF3Q92784 378 aa7.57□□□□□ -1.2
SMCHD1-207ENST00000581711 CLEC1BQ9P126 229 aa7.57□□□□□ -1.2
SMCHD1-207ENST00000581711 CYP1A1P04798 512 aaPredicted RBP7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 STAT5AP42229 794 aa7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 ADAM9Q13443 819 aa7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 FAM126BQ8IXS8 530 aa7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 SEC14L1Q92503 715 aa7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 ZNF428Q96B54 188 aa7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 MBD6Q96DN6 1003 aa7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 RCC1LQ96I51 464 aaKnown RBP7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 PHAXQ9H814 394 aaKnown RBP7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 PCDHB10Q9UN67 800 aa7.56□□□□□ -1.2
SMCHD1-207ENST00000581711 KLF10Q13118 480 aa7.55□□□□□ -1.2
SMCHD1-207ENST00000581711 TEX2Q8IWB9 1127 aa7.55□□□□□ -1.2
SMCHD1-207ENST00000581711 IGDCC4Q8TDY8 1250 aa7.55□□□□□ -1.2
SMCHD1-207ENST00000581711 DEF6Q9H4E7 631 aa7.55□□□□□ -1.2
SMCHD1-207ENST00000581711 HS3ST3A1Q9Y663 406 aa7.55□□□□□ -1.2
SMCHD1-207ENST00000581711 SLC12A7Q9Y666 1083 aa7.55□□□□□ -1.2
SMCHD1-207ENST00000581711 THBDP07204 575 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 PLS3P13797 630 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 SLC6A11P48066 632 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 EPHB4P54760 987 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 SLC7A5Q01650 507 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 CR1LQ2VPA4 569 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 MILR1Q7Z6M3 343 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 MMP19Q99542 508 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 BTG4Q9NY30 223 aa7.54□□□□□ -1.2
SMCHD1-207ENST00000581711 UNCXA6NJT0 531 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 C22orf46C9J442 243 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 SELENOPP49908 381 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 PKN3Q6P5Z2 889 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 CCDC81Q6ZN84 652 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 COPS5Q92905 334 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 WWC2-AS2Q96NR7 200 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 L2HGDHQ9H9P8 463 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 NGRNQ9NPE2 291 aaKnown RBP7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 GPRC5CQ9NQ84 441 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 ING1Q9UK53 422 aaPredicted RBP7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 SUGT1Q9Y2Z0 365 aa7.53□□□□□ -1.2
SMCHD1-207ENST00000581711 PPP2CBP62714 309 aa7.52□□□□□ -1.21
SMCHD1-207ENST00000581711 PPP2CAP67775 309 aa7.52□□□□□ -1.21
SMCHD1-207ENST00000581711 NKX3-2P78367 333 aa7.52□□□□□ -1.21
SMCHD1-207ENST00000581711 LDLRAD1Q5T700 205 aa7.52□□□□□ -1.21
SMCHD1-207ENST00000581711 KLHL6Q8WZ60 621 aa7.52□□□□□ -1.21
SMCHD1-207ENST00000581711 TMEM168Q9H0V1 697 aa7.52□□□□□ -1.21
SMCHD1-207ENST00000581711 JADE2Q9NQC1 790 aa7.52□□□□□ -1.21
SMCHD1-207ENST00000581711 TCAF1Q9Y4C2 921 aa7.52□□□□□ -1.21
SMCHD1-207ENST00000581711 PATE3B3GLJ2 98 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 MUSKO15146 869 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 IL13P35225 146 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 SCRN1Q12765 414 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 SPDYAQ5MJ70 313 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 ARHGEF18Q6ZSZ5 1173 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 KBTBD2Q8IY47 623 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 TMEM87AQ8NBN3 555 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 ZSWIM3Q96MP5 696 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 YIPF4Q9BSR8 244 aa7.51□□□□□ -1.21
SMCHD1-207ENST00000581711 FPR2P25090 351 aa7.5□□□□□ -1.21
SMCHD1-207ENST00000581711 INF2Q27J81 1249 aa7.5□□□□□ -1.21
SMCHD1-207ENST00000581711 ZNF394Q53GI3 561 aa7.5□□□□□ -1.21
SMCHD1-207ENST00000581711 CRBNQ96SW2 442 aa7.5□□□□□ -1.21
SMCHD1-207ENST00000581711 PTPN18Q99952 460 aa7.5□□□□□ -1.21
SMCHD1-207ENST00000581711 PCDHGB7Q9Y5F8 929 aa7.5□□□□□ -1.21
SMCHD1-207ENST00000581711 A0A1W2PQH9 124 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 ZNF76P36508 570 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 MLLT6P55198 1093 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 MROH9Q5TGP6 573 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 SLFN13Q68D06 897 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 RIOX2Q8IUF8 465 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 ZNF513Q8N8E2 541 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 C19orf47Q8N9M1 422 aaKnown RBP7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 MRRFQ96E11 262 aaKnown RBP7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 BACH2Q9BYV9 841 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 SEMA4AQ9H3S1 761 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 AKT3Q9Y243 479 aa7.49□□□□□ -1.21
SMCHD1-207ENST00000581711 KCNH1O95259 989 aa7.48□□□□□ -1.21
SMCHD1-207ENST00000581711 ZCCHC14Q8WYQ9 949 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-207ENST00000581711 CLIC6Q96NY7 704 aa7.48□□□□□ -1.21
SMCHD1-207ENST00000581711 KIAA1522Q9P206 1035 aaPredicted RBP7.48□□□□□ -1.21
SMCHD1-207ENST00000581711 APEX2Q9UBZ4 518 aa7.48□□□□□ -1.21
SMCHD1-207ENST00000581711 TESMINQ9Y4I5 508 aa7.48□□□□□ -1.21
SMCHD1-207ENST00000581711 ZNF623O75123 536 aa7.47□□□□□ -1.21
SMCHD1-207ENST00000581711 MEGF9Q9H1U4 602 aa7.47□□□□□ -1.21
SMCHD1-207ENST00000581711 EMC9Q9Y3B6 208 aa7.47□□□□□ -1.21
SMCHD1-207ENST00000581711 ANKRD34BA5PLL1 514 aa7.46□□□□□ -1.22
SMCHD1-207ENST00000581711 B4GALT4O60513 344 aa7.46□□□□□ -1.22
SMCHD1-207ENST00000581711 RECKO95980 971 aa7.46□□□□□ -1.22
SMCHD1-207ENST00000581711 Q8N1Y9 231 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms