RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 CASTP20810 708 aaKnown RBP15□□□□□ -0.01
SS18-219ENST00000581570 ZMYM1Q5SVZ6 1142 aa15□□□□□ -0.01
SS18-219ENST00000581570 NEK9Q8TD19 979 aa15□□□□□ -0.01
SS18-219ENST00000581570 FBXL18Q96ME1 805 aa15□□□□□ -0.01
SS18-219ENST00000581570 C17orf80Q9BSJ5 609 aa15□□□□□ -0.01
SS18-219ENST00000581570 KCNH6Q9H252 994 aa15□□□□□ -0.01
SS18-219ENST00000581570 HDAC6Q9UBN7 1215 aa15□□□□□ -0.01
SS18-219ENST00000581570 GTF2IRD1Q9UHL9 959 aa15□□□□□ -0.01
SS18-219ENST00000581570 CTNNA3Q9UI47 895 aa15□□□□□ -0.01
SS18-219ENST00000581570 INSL6Q9Y581 213 aa15□□□□□ -0.01
SS18-219ENST00000581570 TANC1Q9C0D5 1861 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 POTEB3A0JP26 581 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 H3BQ06 376 aaPredicted RBP14.99□□□□□ -0.01
SS18-219ENST00000581570 TOP1P11387 765 aaKnown RBP14.99□□□□□ -0.01
SS18-219ENST00000581570 ARHGAP1Q07960 439 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 PTPROQ16827 1216 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 LY6KQ17RY6 165 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 POTEBQ6S5H4 581 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 SEPT14Q6ZU15 432 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 CHST3Q7LGC8 479 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 C7orf31Q8N865 590 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 MRPL38Q96DV4 380 aaKnown RBP14.99□□□□□ -0.01
SS18-219ENST00000581570 TMEM47Q9BQJ4 181 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 FSD1Q9BTV5 496 aa14.99□□□□□ -0.01
SS18-219ENST00000581570 MUC6Q6W4X9 2439 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 WDR19Q8NEZ3 1342 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 ORC4O43929 436 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 PSEN2P49810 448 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 PTK7Q13308 1070 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 DGKDQ16760 1214 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 ZNF618Q5T7W0 954 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
SS18-219ENST00000581570 RGS22Q8NE09 1264 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 ALG1Q9BT22 464 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 TOMM22Q9NS69 142 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 ANAPC4Q9UJX5 808 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 FAM50BQ9Y247 325 aa14.98□□□□□ -0.01
SS18-219ENST00000581570 RBAK-RBAKDNI3L0D1 243 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 FOXP2O15409 715 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 LGR5O75473 907 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 AMHP03971 560 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 PDHBP11177 359 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 TRIM71Q2Q1W2 868 aaKnown RBP14.97□□□□□ -0.01
SS18-219ENST00000581570 TIGD5Q53EQ6 642 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 TRAF7Q6Q0C0 670 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 EP400NLQ6ZTU2 488 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 MYOCDQ8IZQ8 938 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 BANK1Q8NDB2 785 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 DCTPP1Q9H773 170 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 PTPRSQ13332 1948 aa14.97□□□□□ -0.01
SS18-219ENST00000581570 PIEZO1Q92508 2521 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 FGRP09769 529 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 HTRA4P83105 476 aaPredicted RBP14.96□□□□□ -0.01
SS18-219ENST00000581570 MBTPS1Q14703 1052 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 MFSD10Q14728 455 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 USH1GQ495M9 461 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 EPC2Q52LR7 807 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 RRP12Q5JTH9 1297 aaKnown RBP14.96□□□□□ -0.01
SS18-219ENST00000581570 DBF4BQ8NFT6 615 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 WNT8BQ93098 351 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 PABPC5Q96DU9 382 aaKnown RBP14.96□□□□□ -0.01
SS18-219ENST00000581570 SAMD11Q96NU1 681 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 TAAR1Q96RJ0 339 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 TCP11L1Q9NUJ3 509 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 PRKAG3Q9UGI9 489 aa14.96□□□□□ -0.01
SS18-219ENST00000581570 TTC41PQ6P2S7 1318 aa14.95□□□□□ -0.02
SS18-219ENST00000581570 TRIP12Q14669 1992 aaPredicted RBP14.95□□□□□ -0.02
SS18-219ENST00000581570 ZNF200P98182 395 aaPredicted RBP14.95□□□□□ -0.02
SS18-219ENST00000581570 ZP2Q05996 745 aa14.95□□□□□ -0.02
SS18-219ENST00000581570 ZNF543Q08ER8 600 aa14.95□□□□□ -0.02
SS18-219ENST00000581570 GPM6BQ13491 265 aa14.95□□□□□ -0.02
SS18-219ENST00000581570 STXBP2Q15833 593 aa14.95□□□□□ -0.02
SS18-219ENST00000581570 KIAA0753Q2KHM9 967 aa14.95□□□□□ -0.02
SS18-219ENST00000581570 TCEAL5Q5H9L2 206 aa14.95□□□□□ -0.02
SS18-219ENST00000581570 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
SS18-219ENST00000581570 NSUN6Q8TEA1 469 aaKnown RBP14.95□□□□□ -0.02
SS18-219ENST00000581570 TBC1D5Q92609 795 aa14.95□□□□□ -0.02
SS18-219ENST00000581570 UPF3BQ9BZI7 483 aaKnown RBP14.95□□□□□ -0.02
SS18-219ENST00000581570 EMSYQ7Z589 1322 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 C19orf67A6NJJ6 358 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 H3BNC9 293 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 HAS3O00219 553 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 LAMC2Q13753 1193 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 VPS53Q5VIR6 699 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 ADHFE1Q8IWW8 467 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 PI4K2BQ8TCG2 481 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 SYTL5Q8TDW5 730 aaPredicted RBP14.94□□□□□ -0.02
SS18-219ENST00000581570 IWS1Q96ST2 819 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 MAF1Q9H063 256 aa14.94□□□□□ -0.02
SS18-219ENST00000581570 DDX41Q9UJV9 622 aaKnown RBP14.94□□□□□ -0.02
SS18-219ENST00000581570 BRWD1Q9NSI6 2320 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 RSPH10B2B2RC85 870 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 F2P00734 622 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 RSPH10BP0C881 870 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 ZNF286BP0CG31 522 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 SNHG28P0DPA3 235 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 THPOP40225 353 aa14.93□□□□□ -0.02
SS18-219ENST00000581570 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
SS18-219ENST00000581570 ALX1Q15699 326 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms