RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 EARS2Q5JPH6 523 aaKnown RBP17.25■□□□□ 0.35
MKS1-210ENST00000581180 LARP1BQ659C4 914 aaKnown RBP17.25■□□□□ 0.35
MKS1-210ENST00000581180 TAPT1Q6NXT6 567 aa17.25■□□□□ 0.35
MKS1-210ENST00000581180 EEPD1Q7L9B9 569 aa17.25■□□□□ 0.35
MKS1-210ENST00000581180 KRT25Q7Z3Z0 450 aa17.25■□□□□ 0.35
MKS1-210ENST00000581180 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
MKS1-210ENST00000581180 BRMS1Q9HCU9 246 aa17.25■□□□□ 0.35
MKS1-210ENST00000581180 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
MKS1-210ENST00000581180 RBM47A0AV96 593 aaKnown RBP17.24■□□□□ 0.35
MKS1-210ENST00000581180 CYP3A4P08684 503 aa17.24■□□□□ 0.35
MKS1-210ENST00000581180 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
MKS1-210ENST00000581180 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
MKS1-210ENST00000581180 ZFP91Q96JP5 570 aaPredicted RBP17.24■□□□□ 0.35
MKS1-210ENST00000581180 FOXP1Q9H334 677 aaPredicted RBP17.24■□□□□ 0.35
MKS1-210ENST00000581180 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
MKS1-210ENST00000581180 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
MKS1-210ENST00000581180 FAM205CA6NFA0 338 aa17.23■□□□□ 0.35
MKS1-210ENST00000581180 STAM2O75886 525 aa17.23■□□□□ 0.35
MKS1-210ENST00000581180 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
MKS1-210ENST00000581180 PDCP20941 246 aa17.23■□□□□ 0.35
MKS1-210ENST00000581180 SYT1P21579 422 aa17.23■□□□□ 0.35
MKS1-210ENST00000581180 NONOQ15233 471 aaKnown RBP eCLIP17.23■□□□□ 0.35
MKS1-210ENST00000581180 TBCKQ8TEA7 893 aa17.23■□□□□ 0.35
MKS1-210ENST00000581180 INPP4AQ96PE3 977 aaPredicted RBP17.23■□□□□ 0.35
MKS1-210ENST00000581180 UNC93B1Q9H1C4 597 aa17.23■□□□□ 0.35
MKS1-210ENST00000581180 HMX1Q9NP08 348 aaPredicted RBP17.23■□□□□ 0.35
MKS1-210ENST00000581180 UBIAD1Q9Y5Z9 338 aa17.23■□□□□ 0.35
MKS1-210ENST00000581180 WDR81Q562E7 1941 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 KIF28PB7ZC32 967 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 SEPT4O43236 478 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 ITGB5P18084 799 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.35
MKS1-210ENST00000581180 CIITAP33076 1130 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 INF2Q27J81 1249 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 CCDC144BQ3MJ40 725 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 PIK3AP1Q6ZUJ8 805 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 SPRYD3Q8NCJ5 442 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.22■□□□□ 0.35
MKS1-210ENST00000581180 PAK6Q9NQU5 681 aaPredicted RBP17.22■□□□□ 0.35
MKS1-210ENST00000581180 RTEL1Q9NZ71 1219 aa17.22■□□□□ 0.35
MKS1-210ENST00000581180 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 H3BQV1 296 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 ADCY6O43306 1168 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 CCL5P13501 91 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 AKR1A1P14550 325 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 ICAM3P32942 547 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 ADCYAP1R1P41586 468 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 USP11P51784 963 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 SEMA3FQ13275 785 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 IFFO2Q5TF58 517 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 IQSEC1Q6DN90 963 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 CCDC62Q6P9F0 684 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 SEPT14Q6ZU15 432 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 CYP2W1Q8TAV3 490 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 MXRA8Q9BRK3 442 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 JADE2Q9NQC1 790 aa17.21■□□□□ 0.35
MKS1-210ENST00000581180 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.2■□□□□ 0.34
MKS1-210ENST00000581180 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 MEIS1O00470 390 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 ARIH2O95376 493 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 CEP55Q53EZ4 464 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 TMEM63BQ5T3F8 832 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 LHX8Q68G74 356 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 SCFD2Q8WU76 684 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 MBOAT7Q96N66 472 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 WDR11Q9BZH6 1224 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 RNF208Q9H0X6 261 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 FAM184BQ9ULE4 1060 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
MKS1-210ENST00000581180 GNEQ9Y223 722 aaKnown RBP17.2■□□□□ 0.34
MKS1-210ENST00000581180 RBM19Q9Y4C8 960 aaKnown RBP17.2■□□□□ 0.34
MKS1-210ENST00000581180 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 CYP3A7-CYP3A51PA0A087WV96 503 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 STX6O43752 255 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 MYCP01106 439 aaPredicted RBP17.19■□□□□ 0.34
MKS1-210ENST00000581180 SMPD1P17405 629 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 CYP3A7P24462 503 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 CNGA1P29973 690 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 ANP32AP39687 249 aaKnown RBP17.19■□□□□ 0.34
MKS1-210ENST00000581180 TTLL4Q14679 1199 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 DUSP28Q4G0W2 176 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 MOXD1Q6UVY6 613 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 NIPA1Q7RTP0 329 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 NEK8Q86SG6 692 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 NLRX1Q86UT6 975 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 NOSTRINQ8IVI9 506 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 LENG9Q96B70 501 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 GPRASP2Q96D09 838 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
MKS1-210ENST00000581180 DDX41Q9UJV9 622 aaKnown RBP17.19■□□□□ 0.34
MKS1-210ENST00000581180 BRCA2P51587 3418 aa17.19■□□□□ 0.34
MKS1-210ENST00000581180 FIBPO43427 364 aa17.18■□□□□ 0.34
MKS1-210ENST00000581180 MSCO60682 206 aa17.18■□□□□ 0.34
MKS1-210ENST00000581180 TGFB3P10600 412 aa17.18■□□□□ 0.34
MKS1-210ENST00000581180 TNFAIP2Q03169 654 aa17.18■□□□□ 0.34
MKS1-210ENST00000581180 GNPTABQ3T906 1256 aa17.18■□□□□ 0.34
MKS1-210ENST00000581180 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms