RNA–Protein interactions for RNA: ENST00000580617.5

NCOR1-220, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 1,352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-220ENST00000580617 KIF5BP33176 963 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 TRAF1Q13077 416 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 PGM5Q15124 567 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 BRDTQ58F21 947 aaPredicted RBP12.06□□□□□ -0.48
NCOR1-220ENST00000580617 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 CMTR1Q8N1G2 835 aaKnown RBP12.06□□□□□ -0.48
NCOR1-220ENST00000580617 TMTC2Q8N394 836 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 SRBD1Q8N5C6 995 aaKnown RBP12.06□□□□□ -0.48
NCOR1-220ENST00000580617 SAMD3Q8N6K7 520 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 PPP1R13LQ8WUF5 828 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 AFG1LQ8WV93 481 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 RNPC3Q96LT9 517 aaKnown RBP12.06□□□□□ -0.48
NCOR1-220ENST00000580617 ALDH8A1Q9H2A2 487 aaPredicted RBP12.06□□□□□ -0.48
NCOR1-220ENST00000580617 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
NCOR1-220ENST00000580617 SLC12A7Q9Y666 1083 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 UMODL1Q5DID0 1318 aa12.06□□□□□ -0.48
NCOR1-220ENST00000580617 KPNA6O60684 536 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 RGS20O76081 388 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 MMP3P08254 477 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 CSF2RAP15509 400 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 PPIGQ13427 754 aaKnown RBP eCLIP12.05□□□□□ -0.48
NCOR1-220ENST00000580617 C16orf59Q7L2K0 433 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 VSIG10LQ86VR7 867 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 SGMS1Q86VZ5 419 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 TMEM199Q8N511 208 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 RRP36Q96EU6 259 aaKnown RBP12.05□□□□□ -0.48
NCOR1-220ENST00000580617 TCEANC2Q96MN5 208 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 NEK1Q96PY6 1258 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.05□□□□□ -0.488e-10■■□□□ 13.9
NCOR1-220ENST00000580617 LZTS2Q9BRK4 669 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 NOC4LQ9BVI4 516 aaKnown RBP12.05□□□□□ -0.48
NCOR1-220ENST00000580617 HIPK3Q9H422 1215 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 TRMT13Q9NUP7 481 aaKnown RBP12.05□□□□□ -0.48
NCOR1-220ENST00000580617 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 COL6A3P12111 3177 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 CALM1P0DP23 149 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 CALM2P0DP24 149 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 CALM3P0DP25 149 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 GNAQP50148 359 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 NBPF20Q3BBV1 942 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 ADCK5Q3MIX3 580 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 TSGA10IPQ3SY00 556 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 FAM47CQ5HY64 1035 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 MICU3Q86XE3 530 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 EMID1Q96A84 441 aaPredicted RBP12.05□□□□□ -0.48
NCOR1-220ENST00000580617 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
NCOR1-220ENST00000580617 WNT8AQ9H1J5 351 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 MTMR10Q9NXD2 777 aa12.05□□□□□ -0.48
NCOR1-220ENST00000580617 SEC63Q9UGP8 760 aaKnown RBP12.05□□□□□ -0.48
NCOR1-220ENST00000580617 MYO9BQ13459 2157 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 CDH23Q9H251 3354 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 TET1Q8NFU7 2136 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 ACRP10323 421 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 CCND2P30279 289 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 SMAD3P84022 425 aaKnown RBP12.04□□□□□ -0.48
NCOR1-220ENST00000580617 EXOSC10Q01780 885 aaKnown RBP12.04□□□□□ -0.48
NCOR1-220ENST00000580617 TMEM240Q5SV17 173 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 FAM109BQ6ICB4 259 aaPredicted RBP12.04□□□□□ -0.48
NCOR1-220ENST00000580617 NFRKBQ6P4R8 1299 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 TMTC3Q6ZXV5 915 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
NCOR1-220ENST00000580617 FANCBQ8NB91 859 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.48
NCOR1-220ENST00000580617 IL23AQ9NPF7 189 aa12.04□□□□□ -0.48
NCOR1-220ENST00000580617 hCG_1642624A0A1W2PR95 340 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 SORBS3O60504 671 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 CYP2C9P11712 490 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 CCL23P55773 120 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 MRPS9P82933 396 aaKnown RBP12.03□□□□□ -0.48
NCOR1-220ENST00000580617 SP2Q02086 613 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 ZNF697Q5TEC3 545 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 RASIP1Q5U651 963 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 PSRC1Q6PGN9 363 aaPredicted RBP12.03□□□□□ -0.48
NCOR1-220ENST00000580617 APOA5Q6Q788 366 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 ZNF365Q70YC5 407 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 KAT2BQ92831 832 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 FAM161BQ96MY7 647 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 GUCD1Q96NT3 240 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
NCOR1-220ENST00000580617 KAT6AQ92794 2004 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 CNTNAP5Q8WYK1 1306 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 MEIS2O14770 477 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 SUPT20HL2P0C7V6 817 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 ZNF286BP0CG31 522 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 CASTP20810 708 aaKnown RBP12.02□□□□□ -0.49
NCOR1-220ENST00000580617 UBA1P22314 1058 aaKnown RBP12.02□□□□□ -0.49
NCOR1-220ENST00000580617 HSPA4P34932 840 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 PTPN11Q06124 597 aaPredicted RBP12.02□□□□□ -0.49
NCOR1-220ENST00000580617 LAMC2Q13753 1193 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 KRT32Q14532 448 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 DGKDQ16760 1214 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 MYSM1Q5VVJ2 828 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 KCNV1Q6PIU1 500 aa12.02□□□□□ -0.49
NCOR1-220ENST00000580617 SYNE3Q6ZMZ3 975 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms