RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 AFG1LQ8WV93 481 aa17.93■□□□□ 0.46
PMP22-208ENST00000580584 MTG1Q9BT17 334 aaPredicted RBP17.93■□□□□ 0.46
PMP22-208ENST00000580584 BRPF3Q9ULD4 1205 aa17.93■□□□□ 0.46
PMP22-208ENST00000580584 MRVI1Q9Y6F6 885 aa17.93■□□□□ 0.46
PMP22-208ENST00000580584 SORBS3O60504 671 aa17.92■□□□□ 0.46
PMP22-208ENST00000580584 RGS20O76081 388 aa17.92■□□□□ 0.46
PMP22-208ENST00000580584 GH1P01241 217 aa17.92■□□□□ 0.46
PMP22-208ENST00000580584 SMARCA1P28370 1054 aa17.92■□□□□ 0.46
PMP22-208ENST00000580584 SYNE3Q6ZMZ3 975 aa17.92■□□□□ 0.46
PMP22-208ENST00000580584 DDX41Q9UJV9 622 aaKnown RBP17.92■□□□□ 0.46
PMP22-208ENST00000580584 MYH6P13533 1939 aa17.92■□□□□ 0.46
PMP22-208ENST00000580584 MMP3P08254 477 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 CCND2P30279 289 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 CYP2C18P33260 490 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 HSPA4P34932 840 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 CHMP4BP1P59074 171 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 USP17L6PQ6QN14 398 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 Q7L0L9 218 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 VSIG10LQ86VR7 867 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 KCNB2Q92953 911 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 JAKMIP1Q96N16 626 aaKnown RBP17.91■□□□□ 0.46
PMP22-208ENST00000580584 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
PMP22-208ENST00000580584 TRMT13Q9NUP7 481 aaKnown RBP17.91■□□□□ 0.46
PMP22-208ENST00000580584 SNX14Q9Y5W7 946 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 UMODL1Q5DID0 1318 aa17.91■□□□□ 0.46
PMP22-208ENST00000580584 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 ZBTB43O43298 467 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 CSF2RAP15509 400 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 NBPF20Q3BBV1 942 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 FAM47CQ5HY64 1035 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 MFSD5Q6N075 450 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 SMARCC2Q8TAQ2 1214 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.46
PMP22-208ENST00000580584 HIPK3Q9H422 1215 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 PPP4R2Q9NY27 417 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 FRMPD4Q14CM0 1322 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 CNTNAP5Q8WYK1 1306 aa17.9■□□□□ 0.46
PMP22-208ENST00000580584 MEIS2O14770 477 aa17.89■□□□□ 0.45
PMP22-208ENST00000580584 KPNA6O60684 536 aa17.89■□□□□ 0.45
PMP22-208ENST00000580584 REC8O95072 547 aa17.89■□□□□ 0.45
PMP22-208ENST00000580584 HMGB1P09429 215 aaKnown RBP17.89■□□□□ 0.45
PMP22-208ENST00000580584 RTN1Q16799 776 aa17.89■□□□□ 0.45
PMP22-208ENST00000580584 HEATR3Q7Z4Q2 680 aa17.89■□□□□ 0.45
PMP22-208ENST00000580584 CUL5Q93034 780 aa17.89■□□□□ 0.45
PMP22-208ENST00000580584 RNPC3Q96LT9 517 aaKnown RBP17.89■□□□□ 0.45
PMP22-208ENST00000580584 SEZ6LQ9BYH1 1024 aa17.89■□□□□ 0.45
PMP22-208ENST00000580584 NAP1L2Q9ULW6 460 aaPredicted RBP17.89■□□□□ 0.45
PMP22-208ENST00000580584 GOLGA8AA7E2F4 631 aa17.88■□□□□ 0.45
PMP22-208ENST00000580584 GOLGA8BA8MQT2 603 aa17.88■□□□□ 0.45
PMP22-208ENST00000580584 CYP2C9P11712 490 aa17.88■□□□□ 0.45
PMP22-208ENST00000580584 UBA1P22314 1058 aaKnown RBP17.88■□□□□ 0.45
PMP22-208ENST00000580584 MRPS9P82933 396 aaKnown RBP17.88■□□□□ 0.45
PMP22-208ENST00000580584 FGD1P98174 961 aa17.88■□□□□ 0.45
PMP22-208ENST00000580584 SP2Q02086 613 aa17.88■□□□□ 0.45
PMP22-208ENST00000580584 UBE2SQ16763 222 aa17.88■□□□□ 0.45
PMP22-208ENST00000580584 DHX37Q8IY37 1157 aaKnown RBP17.88■□□□□ 0.45
PMP22-208ENST00000580584 DEFB123Q8N688 67 aa17.88■□□□□ 0.45
PMP22-208ENST00000580584 EMID1Q96A84 441 aaPredicted RBP17.88■□□□□ 0.45
PMP22-208ENST00000580584 NOC4LQ9BVI4 516 aaKnown RBP17.88■□□□□ 0.45
PMP22-208ENST00000580584 RBM28Q9NW13 759 aaKnown RBP17.88■□□□□ 0.45
PMP22-208ENST00000580584 BAZ2BQ9UIF8 2168 aaKnown RBP17.87■□□□□ 0.45
PMP22-208ENST00000580584 PIK3CDO00329 1044 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 GGPS1O95749 300 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 ZNF286BP0CG31 522 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 ACRP10323 421 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 CCL23P55773 120 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 APOBRQ0VD83 1088 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 PPIGQ13427 754 aaKnown RBP eCLIP17.87■□□□□ 0.45
PMP22-208ENST00000580584 GPR153Q6NV75 609 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 Q6ZUG5 572 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 TMEM199Q8N511 208 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 PPTC7Q8NI37 304 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 KAT2BQ92831 832 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.87■□□□□ 0.45
PMP22-208ENST00000580584 WNT8AQ9H1J5 351 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 PSTPIP2Q9H939 334 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 RTEL1Q9NZ71 1219 aa17.87■□□□□ 0.45
PMP22-208ENST00000580584 CDC27P30260 824 aa17.86■□□□□ 0.45
PMP22-208ENST00000580584 FUT2Q10981 343 aa17.86■□□□□ 0.45
PMP22-208ENST00000580584 LAMC2Q13753 1193 aa17.86■□□□□ 0.45
PMP22-208ENST00000580584 DGKDQ16760 1214 aa17.86■□□□□ 0.45
PMP22-208ENST00000580584 CELF3Q5SZQ8 465 aaKnown RBP17.86■□□□□ 0.45
PMP22-208ENST00000580584 WWC2Q6AWC2 1192 aa17.86■□□□□ 0.45
PMP22-208ENST00000580584 NFRKBQ6P4R8 1299 aa17.86■□□□□ 0.45
PMP22-208ENST00000580584 C16orf59Q7L2K0 433 aa17.86■□□□□ 0.45
PMP22-208ENST00000580584 BRF1Q92994 677 aa17.86■□□□□ 0.45
PMP22-208ENST00000580584 FAM217BQ9NTX9 383 aaPredicted RBP17.86■□□□□ 0.45
PMP22-208ENST00000580584 SUPT20HL2P0C7V6 817 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 CASTP20810 708 aaKnown RBP17.85■□□□□ 0.45
PMP22-208ENST00000580584 RPS6KB1P23443 525 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 SEMA3FQ13275 785 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 HSDL1Q3SXM5 330 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 MYSM1Q5VVJ2 828 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 KCNV1Q6PIU1 500 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 SPATA33Q96N06 139 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 INPP4AQ96PE3 977 aaPredicted RBP17.85■□□□□ 0.45
PMP22-208ENST00000580584 BCAS3Q9H6U6 928 aa17.85■□□□□ 0.45
PMP22-208ENST00000580584 METAP2P50579 478 aaKnown RBP eCLIP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms