RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ALDH5A1P51649 535 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 IKQ13123 557 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 PPP2R5BQ15173 497 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 ST3GAL2Q16842 350 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 BRDTQ58F21 947 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 RASGRP2Q7LDG7 609 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 RBM23Q86U06 439 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 MORC4Q8TE76 937 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 KAT2BQ92831 832 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 ALG1Q9BT22 464 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 API5Q9BZZ5 524 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 HDAC6Q9UBN7 1215 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 CEP250Q9BV73 2442 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 USP24Q9UPU5 2620 aa16.83■□□□□ 0.29
CSNK1D-213ENST00000580446 MYH8P13535 1937 aa16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 RASA1P20936 1047 aa16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 PDE4BQ07343 736 aa16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 CAMK1Q14012 370 aa16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 BAATQ14032 418 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 AFG1LQ8WV93 481 aa16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 PHF7Q9BWX1 381 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 IFIH1Q9BYX4 1025 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 NYAP2Q9P242 653 aa16.83■□□□□ 0.28
CSNK1D-213ENST00000580446 RAD50Q92878 1312 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 RBM47A0AV96 593 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 GLP2RO95838 553 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 GNAI2P04899 355 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 LINC00271P0C7V0 271 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 DNAJB1P25685 340 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 RBL2Q08999 1139 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 HIC1Q14526 733 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 ALDH1L2Q3SY69 923 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 CTR9Q6PD62 1173 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 CHST3Q7LGC8 479 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 BCL11AQ9H165 835 aa16.82■□□□□ 0.28
CSNK1D-213ENST00000580446 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 GOLIM4O00461 696 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 TXNP10599 105 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 BMP3P12645 472 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 NRIP1P48552 1158 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 SLFN13Q68D06 897 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 MCTP2Q6DN12 878 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 SLC30A10Q6XR72 485 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 FIBCD1Q8N539 461 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 TOP1MTQ969P6 601 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 DNAJC2Q99543 621 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 APOL5Q9BWW9 433 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 GTF2IRD1Q9UHL9 959 aa16.81■□□□□ 0.28
CSNK1D-213ENST00000580446 LCTP09848 1927 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 NFIBO00712 420 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 KPNA6O60684 536 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 PRDM1O75626 825 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 BMPR1AP36894 532 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 THPOP40225 353 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 AMOTL1Q8IY63 956 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 KREMEN2Q8NCW0 462 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 C11orf84Q9BUA3 381 aaPredicted RBP16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 C1orf115Q9H7X2 142 aa16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 BAZ2AQ9UIF9 1905 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-213ENST00000580446 PARNO95453 639 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 BRD1O95696 1058 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 MMP3P08254 477 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 ZNF286BP0CG31 522 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 CALML3P27482 149 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 NUBP1P53384 320 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 COASYQ13057 564 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 POLA2Q14181 598 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 PUM1Q14671 1186 aaKnown RBP eCLIP16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 SESTD1Q86VW0 696 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 C7orf31Q8N865 590 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 CEP95Q96GE4 821 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 CDH22Q9UJ99 828 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 CCPG1Q9ULG6 757 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 SLC4A4Q9Y6R1 1079 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 FRYLO94915 3013 aa16.79■□□□□ 0.28
CSNK1D-213ENST00000580446 PTPDC1A2A3K4 754 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 CTSHP09668 335 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 STAT2P52630 851 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 PDE4DQ08499 809 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 PTK7Q13308 1070 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 TKFCQ3LXA3 575 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 KCTD1Q719H9 257 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 AACSQ86V21 672 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 DCLK2Q8N568 766 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 EFHBQ8N7U6 833 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 HINFPQ9BQA5 517 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 LMAN2LQ9H0V9 348 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 TSHZ2Q9NRE2 1034 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 MTMR7Q9Y216 660 aa16.78■□□□□ 0.28
CSNK1D-213ENST00000580446 MICAL3Q7RTP6 2002 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 IGKV6D-41A0A0C4DH26 115 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 RSPH10B2B2RC85 870 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 C5orf67F2Z3F1 127 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 PER2O15055 1255 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 MMP1P03956 469 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 RSPH10BP0C881 870 aa16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 HOXB3P14651 431 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-213ENST00000580446 PSEN2P49810 448 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms