RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 SLURP2P0DP57 97 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 GNA11P29992 359 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 ORC2Q13416 577 aaPredicted RBP11.16□□□□□ -0.62
SNX11-206ENST00000580219 TTC38Q5R3I4 469 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 POTEEQ6S8J3 1075 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 C17orf99Q6UX52 265 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 CKAP2LQ8IYA6 745 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 DCAF4Q8WV16 495 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 SDF4Q9BRK5 362 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 ANO10Q9NW15 660 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
SNX11-206ENST00000580219 GABRQQ9UN88 632 aa11.16□□□□□ -0.62
SNX11-206ENST00000580219 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 MPHOSPH10O00566 681 aaKnown RBP11.15□□□□□ -0.62
SNX11-206ENST00000580219 USP2O75604 605 aaPredicted RBP11.15□□□□□ -0.62
SNX11-206ENST00000580219 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
SNX11-206ENST00000580219 ATP2C1P98194 919 aaPredicted RBP11.15□□□□□ -0.62
SNX11-206ENST00000580219 MAP3K10Q02779 954 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 SHHQ15465 462 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 ARL6IP4Q66PJ3 421 aaKnown RBP11.15□□□□□ -0.62
SNX11-206ENST00000580219 KRT25Q7Z3Z0 450 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 HEATR3Q7Z4Q2 680 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 TRIM44Q96DX7 344 aaPredicted RBP11.15□□□□□ -0.62
SNX11-206ENST00000580219 CCDC34Q96HJ3 373 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 PYM1Q9BRP8 204 aaKnown RBP11.15□□□□□ -0.62
SNX11-206ENST00000580219 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNX11-206ENST00000580219 C6orf50Q9HD87 102 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 KIAA1468Q9P260 1216 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 USP25Q9UHP3 1055 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 KCNH3Q9ULD8 1083 aa11.15□□□□□ -0.62
SNX11-206ENST00000580219 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.63
SNX11-206ENST00000580219 DOCK3Q8IZD9 2030 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 MYO15AQ9UKN7 3530 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 CCDC194A0A1B0GVG4 234 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 LAD1O00515 517 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 TBC1D12O60347 775 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 GOLGA8HP0CJ92 632 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 BMP1P13497 986 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 NAPAP54920 295 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 ABCB5Q2M3G0 1257 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 SUPT20HL1Q3ZLR7 823 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 ANO6Q4KMQ2 910 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 EARS2Q5JPH6 523 aaKnown RBP11.14□□□□□ -0.63
SNX11-206ENST00000580219 C9orf50Q5SZB4 431 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 KANK3Q6NY19 840 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 PIK3AP1Q6ZUJ8 805 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 TEX2Q8IWB9 1127 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 LRRC47Q8N1G4 583 aaKnown RBP11.14□□□□□ -0.63
SNX11-206ENST00000580219 GMCL1P1Q8NEA9 526 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
SNX11-206ENST00000580219 HOOK2Q96ED9 719 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 MTMR8Q96EF0 704 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 NAT10Q9H0A0 1025 aaKnown RBP11.14□□□□□ -0.63
SNX11-206ENST00000580219 GLT8D2Q9H1C3 349 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 CHD7Q9P2D1 2997 aa11.14□□□□□ -0.63
SNX11-206ENST00000580219 PNMA6FA0A0J9YX94 578 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 BTBD19C9JJ37 291 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 ZNF165P49910 485 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 FOXK1P85037 733 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 ICA1Q05084 483 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 ZRSR1Q15695 479 aaKnown RBP11.13□□□□□ -0.63
SNX11-206ENST00000580219 DCAF15Q66K64 600 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 TYW1BQ6NUM6 668 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 KRBA2Q6ZNG9 492 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 MIGA2Q7L4E1 593 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 CEP57L1Q8IYX8 460 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 PIBF1Q8WXW3 757 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNX11-206ENST00000580219 GMCL1Q96IK5 515 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 FBXL18Q96ME1 805 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 CLIC6Q96NY7 704 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 PIGSQ96S52 555 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 BPIFA3Q9BQP9 254 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNX11-206ENST00000580219 CBX8Q9HC52 389 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 ZCCHC17Q9NP64 241 aaKnown RBP11.13□□□□□ -0.63
SNX11-206ENST00000580219 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 PCDHA6Q9UN73 950 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 PCDHA8Q9Y5H6 950 aa11.13□□□□□ -0.63
SNX11-206ENST00000580219 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 FRMPD2Q68DX3 1309 aaPredicted RBP11.12□□□□□ -0.63
SNX11-206ENST00000580219 FAM205CA6NFA0 338 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 SMCO2A6NFE2 343 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
SNX11-206ENST00000580219 PRPHP41219 470 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 FCGRTP55899 365 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 PTGDRQ13258 359 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 DSG2Q14126 1118 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 NONOQ15233 471 aaKnown RBP eCLIP11.12□□□□□ -0.63
SNX11-206ENST00000580219 CCDC85BQ15834 202 aaPredicted RBP11.12□□□□□ -0.63
SNX11-206ENST00000580219 LRRC26Q2I0M4 334 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 PXYLP1Q8TE99 480 aa11.12□□□□□ -0.63
SNX11-206ENST00000580219 GAS2L1Q99501 681 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms