RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 DDAH1O94760 285 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 NKX3-2P78367 333 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 APOA5Q6Q788 366 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 NUP88Q99567 741 aaPredicted RBP11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 TEX13BQ9BXU2 312 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 NID2Q14112 1375 aa11.91□□□□□ -0.5
SNRPD1-203ENST00000579618 KLF18A0A0U1RQI7 1052 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 CCDC196A0A1B0GTZ2 297 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 ZBTB43O43298 467 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 NMT2O60551 498 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 IL9P15248 144 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 TLK2Q86UE8 772 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 FAM178BQ8IXR5 827 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 GJD3Q8N144 294 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 SLC9A7Q96T83 725 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 SLF1Q9BQI6 1058 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 TMEM47Q9BQJ4 181 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 CLIP2Q9UDT6 1046 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 DDX49Q9Y6V7 483 aaKnown RBP11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 PIEZO1Q92508 2521 aa11.9□□□□□ -0.5
SNRPD1-203ENST00000579618 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 CABYRO75952 493 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 PFKMP08237 780 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 CYP2C9P11712 490 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 PDIA3P30101 505 aaKnown RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 SSTR3P32745 418 aaPredicted RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 KIF5BP33176 963 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 TNFAIP2Q03169 654 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 APOBRQ0VD83 1088 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 FSCN1Q16658 493 aaKnown RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 NOL8Q76FK4 1167 aaKnown RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 ZNF654Q8IZM8 581 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 CPXCR1Q8N123 301 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 ANKRD35Q8N283 1001 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 GMCL1P1Q8NEA9 526 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 PHOX2BQ99453 314 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 SLKQ9H2G2 1235 aaPredicted RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 UBE2ZQ9H832 354 aaPredicted RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 GOPCQ9HD26 462 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 TRMT13Q9NUP7 481 aaKnown RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 RBM28Q9NW13 759 aaKnown RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 TPCN1Q9ULQ1 816 aa11.89□□□□□ -0.51
SNRPD1-203ENST00000579618 LCTP09848 1927 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 GOLGA8BA8MQT2 603 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 PFKFB2O60825 505 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 CD2BP2O95400 341 aaKnown RBP11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 GNAQP50148 359 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 METAP2P50579 478 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 CNTN2Q02246 1040 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 TROAPQ12815 778 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 GPATCH4Q5T3I0 446 aaKnown RBP11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 CPLX2Q6PUV4 134 aaKnown RBP11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 HERC6Q8IVU3 1022 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 CTCFLQ8NI51 663 aaPredicted RBP11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 DCAF4Q8WV16 495 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 TMX3Q96JJ7 454 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 RAVER2Q9HCJ3 691 aaKnown RBP11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 BRPF3Q9ULD4 1205 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 USP34Q70CQ2 3546 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 SIP14410 1827 aa11.88□□□□□ -0.51
SNRPD1-203ENST00000579618 RBAK-RBAKDNI3L0D1 243 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 DYNC1LI2O43237 492 aaPredicted RBP11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 CDKL5O76039 1030 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 ACTN1P12814 892 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 SMPD1P17405 629 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 ME3Q16798 604 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 LEXMQ3ZCV2 418 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 ASPRV1Q53RT3 343 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 TMCO2Q7Z6W1 182 aaPredicted RBP11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 MICU3Q86XE3 530 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 FANCBQ8NB91 859 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 PPP1R13LQ8WUF5 828 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 GTF3C6Q969F1 213 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 GMCL1Q96IK5 515 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 LZTS2Q9BRK4 669 aa11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 NAP1L2Q9ULW6 460 aaPredicted RBP11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.87□□□□□ -0.51
SNRPD1-203ENST00000579618 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.86□□□□□ -0.51
SNRPD1-203ENST00000579618 GOLGA8AA7E2F4 631 aa11.86□□□□□ -0.51
SNRPD1-203ENST00000579618 ATP2A1O14983 1001 aa11.86□□□□□ -0.51
SNRPD1-203ENST00000579618 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
SNRPD1-203ENST00000579618 ALADP13716 330 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms