RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 BCCIPQ9P287 314 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSI2-209ENST00000579483 SHTN1A0MZ66 631 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 PSMD14O00487 310 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 GABPAQ06546 454 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 ARMCX2Q7L311 632 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 ELMOD1Q8N336 334 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 RDH13Q8NBN7 331 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 RAB3IL1Q8TBN0 382 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 HAUS1Q96CS2 278 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 MAPK8IP1Q9UQF2 711 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 UBN2Q6ZU65 1347 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 ZBBXA8MT70 800 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 PFDN6O15212 129 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 FCGRTP55899 365 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 RABL6Q3YEC7 729 aaPredicted RBP11.22□□□□□ -0.61
MSI2-209ENST00000579483 FEZ2Q9UHY8 353 aaPredicted RBP11.22□□□□□ -0.61
MSI2-209ENST00000579483 SLC8A2Q9UPR5 921 aa11.22□□□□□ -0.61
MSI2-209ENST00000579483 PNPLA7Q6ZV29 1317 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 CCL15-CCL14A0A0B4J2E2 113 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 CCL15Q16663 113 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 ZNF365Q70YC5 407 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 C2orf40Q9H1Z8 148 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 SERTAD1Q9UHV2 236 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 CTNND1O60716 968 aaKnown RBP11.21□□□□□ -0.61
MSI2-209ENST00000579483 HSF2BPO75031 334 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 EPHA10Q5JZY3 1008 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.61
MSI2-209ENST00000579483 FAM20AQ96MK3 541 aa11.21□□□□□ -0.61
MSI2-209ENST00000579483 RPAP3Q9H6T3 665 aaPredicted RBP11.21□□□□□ -0.61
MSI2-209ENST00000579483 NFX1Q12986 1120 aaKnown RBP11.21□□□□□ -0.62
MSI2-209ENST00000579483 TMEM47Q9BQJ4 181 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 RIC8AQ9NPQ8 531 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 ODF2LQ9ULJ1 636 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 CCDC66A2RUB6 948 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 DENND3A2RUS2 1198 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 ORC4O43929 436 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 DLATP10515 647 aaKnown RBP11.21□□□□□ -0.62
MSI2-209ENST00000579483 GYS1P13807 737 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 NFKBIAP25963 317 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 PIK3CAP42336 1068 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 PDE6CP51160 858 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 HMGCS2P54868 508 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 CCDC122Q5T0U0 273 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 TRIM50Q86XT4 487 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 TMTC1Q8IUR5 882 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 NT5C1BQ96P26 610 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 DAGLAQ9Y4D2 1042 aa11.21□□□□□ -0.62
MSI2-209ENST00000579483 EPHX2P34913 555 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 KCNJ6P48051 423 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 TUBB2AQ13885 445 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.2□□□□□ -0.62
MSI2-209ENST00000579483 C16orf45Q96MC5 204 aaPredicted RBP11.2□□□□□ -0.62
MSI2-209ENST00000579483 TUBB2BQ9BVA1 445 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 CSF1RP07333 972 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 FOXO4P98177 505 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 PTK2Q05397 1052 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 ADAM9Q13443 819 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 THEM5Q8N1Q8 247 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 RPF1Q9H9Y2 349 aaKnown RBP11.2□□□□□ -0.62
MSI2-209ENST00000579483 TSKSQ9UJT2 592 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 GUCA1BQ9UMX6 200 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 NFE2L3Q9Y4A8 694 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 RGS12O14924 1447 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 PPP6R2O75170 966 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 MFAP3P55082 362 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 SPECC1LQ69YQ0 1117 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 CCDC186Q7Z3E2 898 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 ZNF512BQ96KM6 892 aaPredicted RBP11.2□□□□□ -0.62
MSI2-209ENST00000579483 BAG1Q99933 345 aaPredicted RBP11.2□□□□□ -0.62
MSI2-209ENST00000579483 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 FAM49AQ9H0Q0 323 aaPredicted RBP11.2□□□□□ -0.62
MSI2-209ENST00000579483 K7ERI5 159 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 STAM2O75886 525 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 ARL6IP4Q66PJ3 421 aaKnown RBP11.2□□□□□ -0.62
MSI2-209ENST00000579483 ATP6V0A4Q9HBG4 840 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 PARVGQ9HBI0 331 aa11.2□□□□□ -0.62
MSI2-209ENST00000579483 SLIT1O75093 1534 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 ACTN4O43707 911 aaKnown RBP11.19□□□□□ -0.62
MSI2-209ENST00000579483 ALDH3A1P30838 453 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 PSMC2P35998 433 aaKnown RBP11.19□□□□□ -0.62
MSI2-209ENST00000579483 PSMD2Q13200 908 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 KYAT1Q16773 422 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 SLC10A5Q5PT55 438 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 GPRC5AQ8NFJ5 357 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 KIAA1586Q9HCI6 787 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 SARNPP82979 210 aaKnown RBP11.19□□□□□ -0.62
MSI2-209ENST00000579483 EXOC4Q96A65 974 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 CCDC51Q96ER9 411 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 DEFB129Q9H1M3 183 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 NYAP2Q9P242 653 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 CYP2D7A0A087X1C5 515 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 MED7O43513 233 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 RNF8O76064 485 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
MSI2-209ENST00000579483 ARHGAP44Q17R89 818 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 TMTC3Q6ZXV5 915 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 TAOK1Q7L7X3 1001 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms