RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 APOBRQ0VD83 1088 aa30.95■■■□□ 2.55
LINC00271-205ENST00000579339 USP17L6PQ6QN14 398 aa30.95■■■□□ 2.55
LINC00271-205ENST00000579339 FAM126BQ8IXS8 530 aa30.95■■■□□ 2.55
LINC00271-205ENST00000579339 POLR3EQ9NVU0 708 aa30.95■■■□□ 2.55
LINC00271-205ENST00000579339 RBM28Q9NW13 759 aaKnown RBP30.95■■■□□ 2.55
LINC00271-205ENST00000579339 SZT2Q5T011 3432 aa30.95■■■□□ 2.55
LINC00271-205ENST00000579339 RGS20O76081 388 aa30.94■■■□□ 2.54
LINC00271-205ENST00000579339 RAG1P15918 1043 aa30.94■■■□□ 2.54
LINC00271-205ENST00000579339 PURAQ00577 322 aaKnown RBP30.94■■■□□ 2.54
LINC00271-205ENST00000579339 ARHGAP1Q07960 439 aa30.94■■■□□ 2.54
LINC00271-205ENST00000579339 VSIG10LQ86VR7 867 aa30.94■■■□□ 2.54
LINC00271-205ENST00000579339 SLC43A3Q8NBI5 491 aa30.94■■■□□ 2.54
LINC00271-205ENST00000579339 GPKOWQ92917 476 aaPredicted RBP eCLIP30.94■■■□□ 2.54
LINC00271-205ENST00000579339 BRF1Q92994 677 aa30.94■■■□□ 2.54
LINC00271-205ENST00000579339 TBX21Q9UL17 535 aa30.94■■■□□ 2.54
LINC00271-205ENST00000579339 MRVI1Q9Y6F6 885 aa30.94■■■□□ 2.54
LINC00271-205ENST00000579339 GH1P01241 217 aa30.93■■■□□ 2.54
LINC00271-205ENST00000579339 CASTP20810 708 aaKnown RBP30.93■■■□□ 2.54
LINC00271-205ENST00000579339 RPS6KB1P23443 525 aa30.93■■■□□ 2.54
LINC00271-205ENST00000579339 CDC27P30260 824 aa30.93■■■□□ 2.54
LINC00271-205ENST00000579339 CCND2P30279 289 aa30.93■■■□□ 2.54
LINC00271-205ENST00000579339 BRDTQ58F21 947 aaPredicted RBP30.93■■■□□ 2.54
LINC00271-205ENST00000579339 HEATR3Q7Z4Q2 680 aa30.93■■■□□ 2.54
LINC00271-205ENST00000579339 SMARCC2Q8TAQ2 1214 aa30.93■■■□□ 2.54
LINC00271-205ENST00000579339 PPP1R13LQ8WUF5 828 aa30.93■■■□□ 2.54
LINC00271-205ENST00000579339 AFG1LQ8WV93 481 aa30.93■■■□□ 2.54
LINC00271-205ENST00000579339 FAM217BQ9NTX9 383 aaPredicted RBP30.93■■■□□ 2.54
LINC00271-205ENST00000579339 DDX41Q9UJV9 622 aaKnown RBP30.93■■■□□ 2.54
LINC00271-205ENST00000579339 KIAA1217Q5T5P2 1943 aa30.92■■■□□ 2.54
LINC00271-205ENST00000579339 A6NJR5 290 aa30.92■■■□□ 2.54
LINC00271-205ENST00000579339 CUL5Q93034 780 aa30.92■■■□□ 2.54
LINC00271-205ENST00000579339 LRCH3Q96II8 777 aa30.92■■■□□ 2.54
LINC00271-205ENST00000579339 MTG1Q9BT17 334 aaPredicted RBP30.92■■■□□ 2.54
LINC00271-205ENST00000579339 USP26Q9BXU7 913 aa30.92■■■□□ 2.54
LINC00271-205ENST00000579339 MEIS2O14770 477 aa30.91■■■□□ 2.54
LINC00271-205ENST00000579339 TLR3O15455 904 aaKnown RBP30.91■■■□□ 2.54
LINC00271-205ENST00000579339 FUT2Q10981 343 aa30.91■■■□□ 2.54
LINC00271-205ENST00000579339 FRMPD4Q14CM0 1322 aa30.91■■■□□ 2.54
LINC00271-205ENST00000579339 SORBS3O60504 671 aa30.9■■■□□ 2.54
LINC00271-205ENST00000579339 CD4P01730 458 aa30.9■■■□□ 2.54
LINC00271-205ENST00000579339 PSMA5P28066 241 aa30.9■■■□□ 2.54
LINC00271-205ENST00000579339 UBE2SQ16763 222 aa30.9■■■□□ 2.54
LINC00271-205ENST00000579339 TRPV6Q9H1D0 765 aa30.9■■■□□ 2.54
LINC00271-205ENST00000579339 PSTPIP2Q9H939 334 aa30.9■■■□□ 2.54
LINC00271-205ENST00000579339 PIK3CDO00329 1044 aa30.89■■■□□ 2.54
LINC00271-205ENST00000579339 MMP3P08254 477 aa30.89■■■□□ 2.54
LINC00271-205ENST00000579339 METAP2P50579 478 aaKnown RBP eCLIP30.89■■■□□ 2.54
LINC00271-205ENST00000579339 C9orf50Q5SZB4 431 aa30.89■■■□□ 2.54
LINC00271-205ENST00000579339 WWC2Q6AWC2 1192 aa30.89■■■□□ 2.54
LINC00271-205ENST00000579339 PPP1R12CQ9BZL4 782 aa30.89■■■□□ 2.54
LINC00271-205ENST00000579339 V9GY48 417 aaPredicted RBP30.89■■■□□ 2.54
LINC00271-205ENST00000579339 EPB41L2O43491 1005 aaKnown RBP30.88■■■□□ 2.53
LINC00271-205ENST00000579339 B4GALT4O60513 344 aa30.88■■■□□ 2.53
LINC00271-205ENST00000579339 ADD1P35611 737 aaKnown RBP30.88■■■□□ 2.53
LINC00271-205ENST00000579339 MRPS9P82933 396 aaKnown RBP30.88■■■□□ 2.53
LINC00271-205ENST00000579339 TIMP1P01033 207 aa30.87■■■□□ 2.53
LINC00271-205ENST00000579339 RCAN1P53805 252 aa30.87■■■□□ 2.53
LINC00271-205ENST00000579339 EPHB4P54760 987 aa30.87■■■□□ 2.53
LINC00271-205ENST00000579339 CHMP4BP1P59074 171 aa30.87■■■□□ 2.53
LINC00271-205ENST00000579339 SHHQ15465 462 aa30.87■■■□□ 2.53
LINC00271-205ENST00000579339 NBPF20Q3BBV1 942 aa30.87■■■□□ 2.53
LINC00271-205ENST00000579339 RTEL1Q9NZ71 1219 aa30.87■■■□□ 2.53
LINC00271-205ENST00000579339 KPNA6O60684 536 aa30.86■■■□□ 2.53
LINC00271-205ENST00000579339 LRIT3Q3SXY7 679 aa30.86■■■□□ 2.53
LINC00271-205ENST00000579339 FAM47CQ5HY64 1035 aa30.86■■■□□ 2.53
LINC00271-205ENST00000579339 TYW1BQ6NUM6 668 aa30.86■■■□□ 2.53
LINC00271-205ENST00000579339 DHX37Q8IY37 1157 aaKnown RBP30.86■■■□□ 2.53
LINC00271-205ENST00000579339 ALDH8A1Q9H2A2 487 aaPredicted RBP30.86■■■□□ 2.53
LINC00271-205ENST00000579339 SCN10AQ9Y5Y9 1956 aa30.85■■■□□ 2.53
LINC00271-205ENST00000579339 UBA1P22314 1058 aaKnown RBP30.85■■■□□ 2.53
LINC00271-205ENST00000579339 SP2Q02086 613 aa30.85■■■□□ 2.53
LINC00271-205ENST00000579339 FPGSQ05932 587 aa30.85■■■□□ 2.53
LINC00271-205ENST00000579339 SEZ6LQ9BYH1 1024 aa30.85■■■□□ 2.53
LINC00271-205ENST00000579339 AGXT2Q9BYV1 514 aa30.85■■■□□ 2.53
LINC00271-205ENST00000579339 TRMT13Q9NUP7 481 aaKnown RBP30.85■■■□□ 2.53
LINC00271-205ENST00000579339 GGPS1O95749 300 aa30.84■■■□□ 2.53
LINC00271-205ENST00000579339 CYP2C18P33260 490 aa30.84■■■□□ 2.53
LINC00271-205ENST00000579339 NAPAP54920 295 aa30.84■■■□□ 2.53
LINC00271-205ENST00000579339 LAMC2Q13753 1193 aa30.84■■■□□ 2.53
LINC00271-205ENST00000579339 RUFY3Q7L099 469 aa30.84■■■□□ 2.53
LINC00271-205ENST00000579339 EMID1Q96A84 441 aaPredicted RBP30.84■■■□□ 2.53
LINC00271-205ENST00000579339 ZSWIM6Q9HCJ5 1215 aa30.84■■■□□ 2.53
LINC00271-205ENST00000579339 UMODL1Q5DID0 1318 aa30.83■■■□□ 2.53
LINC00271-205ENST00000579339 CELF3Q5SZQ8 465 aaKnown RBP30.83■■■□□ 2.53
LINC00271-205ENST00000579339 MYSM1Q5VVJ2 828 aa30.83■■■□□ 2.53
LINC00271-205ENST00000579339 KCNV1Q6PIU1 500 aa30.83■■■□□ 2.53
LINC00271-205ENST00000579339 FBXL16Q8N461 479 aa30.83■■■□□ 2.53
LINC00271-205ENST00000579339 INPP4AQ96PE3 977 aaPredicted RBP30.83■■■□□ 2.53
LINC00271-205ENST00000579339 UPF3BQ9BZI7 483 aaKnown RBP30.83■■■□□ 2.53
LINC00271-205ENST00000579339 BCAS3Q9H6U6 928 aa30.83■■■□□ 2.53
LINC00271-205ENST00000579339 STXBP3O00186 592 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 SEMA3FQ13275 785 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 GNPTABQ3T906 1256 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 PCNX4Q63HM2 1172 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 MFSD5Q6N075 450 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 PPTC7Q8NI37 304 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 KAT2BQ92831 832 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 HIPK3Q9H422 1215 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 CYP46A1Q9Y6A2 500 aa30.82■■■□□ 2.52
LINC00271-205ENST00000579339 NID2Q14112 1375 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms