RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 CCND2P30279 289 aa16.63■□□□□ 0.25
MKS1-207ENST00000578789 ATN1P54259 1190 aaPredicted RBP16.63■□□□□ 0.25
MKS1-207ENST00000578789 NAPAP54920 295 aa16.63■□□□□ 0.25
MKS1-207ENST00000578789 RTP1P59025 263 aa16.63■□□□□ 0.25
MKS1-207ENST00000578789 BEX3Q00994 111 aa16.63■□□□□ 0.25
MKS1-207ENST00000578789 RNF26Q9BY78 433 aaPredicted RBP16.63■□□□□ 0.25
MKS1-207ENST00000578789 ELP1O95163 1332 aa16.63■□□□□ 0.25
MKS1-207ENST00000578789 LTBP2Q14767 1821 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 STAM2O75886 525 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 MYCLP12524 364 aaPredicted RBP16.62■□□□□ 0.25
MKS1-207ENST00000578789 SCG2P13521 617 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 CCT2P78371 535 aaKnown RBP16.62■□□□□ 0.25
MKS1-207ENST00000578789 PKN1Q16512 942 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 SEPT14Q6ZU15 432 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 OR6J1Q8NGC5 347 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 COPS5Q92905 334 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 GLT1D1Q96MS3 346 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 NCOA5Q9HCD5 579 aaKnown RBP16.62■□□□□ 0.25
MKS1-207ENST00000578789 RIC8AQ9NPQ8 531 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 STARD7Q9NQZ5 370 aa16.62■□□□□ 0.25
MKS1-207ENST00000578789 CEP290O15078 2479 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 ESYT2A0FGR8 921 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 ZEB2O60315 1214 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 CABYRO75952 493 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 MRPS9P82933 396 aaKnown RBP16.61■□□□□ 0.25
MKS1-207ENST00000578789 ANKRD1Q15327 319 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 UBE2SQ16763 222 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 TRIM60Q495X7 471 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 PCNX4Q63HM2 1172 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 XRRA1Q6P2D8 792 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 PHKBQ93100 1093 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 GLT8D2Q9H1C3 349 aa16.61■□□□□ 0.25
MKS1-207ENST00000578789 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
MKS1-207ENST00000578789 A6NJR5 290 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 GH1P01241 217 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 CPT1AP50416 773 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 ADCY7P51828 1080 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 AK2P54819 239 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 LY6KQ17RY6 165 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 KCNV1Q6PIU1 500 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 EMID1Q96A84 441 aaPredicted RBP16.6■□□□□ 0.25
MKS1-207ENST00000578789 INPP4AQ96PE3 977 aaPredicted RBP16.6■□□□□ 0.25
MKS1-207ENST00000578789 LARP6Q9BRS8 491 aaKnown RBP16.6■□□□□ 0.25
MKS1-207ENST00000578789 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 ATP11BQ9Y2G3 1177 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 SCN10AQ9Y5Y9 1956 aa16.6■□□□□ 0.25
MKS1-207ENST00000578789 A0A0U1RQG5 324 aaPredicted RBP16.59■□□□□ 0.25
MKS1-207ENST00000578789 SPDYE3A6NKU9 549 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 ICAM3P32942 547 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 CLK2P49760 499 aaKnown RBP16.59■□□□□ 0.25
MKS1-207ENST00000578789 AKAP17AQ02040 695 aaKnown RBP16.59■□□□□ 0.25
MKS1-207ENST00000578789 ARHGAP1Q07960 439 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 BRDTQ58F21 947 aaPredicted RBP16.59■□□□□ 0.25
MKS1-207ENST00000578789 CXCL17Q6UXB2 119 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 ANKRD33Q7Z3H0 272 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 TOX2Q96NM4 488 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 SLC26A6Q9BXS9 759 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 POLR3EQ9NVU0 708 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 ZMYND8Q9ULU4 1186 aaPredicted RBP16.59■□□□□ 0.25
MKS1-207ENST00000578789 PCDHA6Q9UN73 950 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 PCDHA8Q9Y5H6 950 aa16.59■□□□□ 0.25
MKS1-207ENST00000578789 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.25
MKS1-207ENST00000578789 SMCO2A6NFE2 343 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 CPLX1O14810 134 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 PFKFB2O60825 505 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 TGFB3P10600 412 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 CDK7P50613 346 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 PURAQ00577 322 aaKnown RBP16.58■□□□□ 0.24
MKS1-207ENST00000578789 SCRN1Q12765 414 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 STK3Q13188 491 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 AP3B2Q13367 1082 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 GNPTABQ3T906 1256 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 TRIM22Q8IYM9 498 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 SLC43A3Q8NBI5 491 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
MKS1-207ENST00000578789 SEZ6LQ9BYH1 1024 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 ZMYND12Q9H0C1 365 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 PRO3102Q9H379 93 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 EHMT1Q9H9B1 1298 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 PDLIM7Q9NR12 457 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 MROH7Q68CQ1 1323 aa16.58■□□□□ 0.24
MKS1-207ENST00000578789 ARVCFO00192 962 aa16.57■□□□□ 0.24
MKS1-207ENST00000578789 KPNA6O60684 536 aa16.57■□□□□ 0.24
MKS1-207ENST00000578789 FOSP01100 380 aaPredicted RBP16.57■□□□□ 0.24
MKS1-207ENST00000578789 MMP3P08254 477 aa16.57■□□□□ 0.24
MKS1-207ENST00000578789 SYN1P17600 705 aa16.57■□□□□ 0.24
MKS1-207ENST00000578789 UBA1P22314 1058 aaKnown RBP16.57■□□□□ 0.24
MKS1-207ENST00000578789 RBM25P49756 843 aaKnown RBP16.57■□□□□ 0.24
MKS1-207ENST00000578789 TLE2Q04725 743 aa16.57■□□□□ 0.24
MKS1-207ENST00000578789 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
MKS1-207ENST00000578789 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
MKS1-207ENST00000578789 CCDC148Q8NFR7 591 aa16.57■□□□□ 0.24
MKS1-207ENST00000578789 ZFP91Q96JP5 570 aaPredicted RBP16.57■□□□□ 0.24
MKS1-207ENST00000578789 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
MKS1-207ENST00000578789 DOCK5Q9H7D0 1870 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 GRIN2DO15399 1336 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 STK36Q9NRP7 1315 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 SPATA31C2B4DYI2 1134 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 FIBPO43427 364 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms