RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 DCLK2Q8N568 766 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MKL1Q969V6 931 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RIPOR3Q96MK2 946 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SAMD11Q96NU1 681 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ZBED2Q9BTP6 218 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PDGFCQ9NRA1 345 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 LOC400499M0QZD8 3231 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PLIN4Q96Q06 1357 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 WDFY3Q8IZQ1 3526 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CNOT1A5YKK6 2376 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MYH7P12883 1935 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RBM47A0AV96 593 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 GOLIM4O00461 696 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 NCK2O43639 380 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PLA2G6O60733 806 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 LMNAP02545 664 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RLBP1P12271 317 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PTGS1P23219 599 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 STAT2P52630 851 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RRP1P56182 461 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 DEFB103AP81534 67 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SBK1Q52WX2 424 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 FAM47CQ5HY64 1035 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 EP400NLQ6ZTU2 488 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 KIAA1211Q6ZU35 1233 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TMCO2Q7Z6W1 182 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 FAM160B2Q86V87 743 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SESTD1Q86VW0 696 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 FBXO22Q8NEZ5 403 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 HOMER2Q9NSB8 354 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CLDND1Q9NY35 253 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CYP39A1Q9NYL5 469 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ADD3Q9UEY8 706 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 NOD1Q9Y239 953 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TENM4Q6N022 2769 aa8.55□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MICAL3Q7RTP6 2002 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 A6NJR5 290 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MYL3P08590 195 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ARP10275 920 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 BMP3P12645 472 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SELPP16109 830 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 UBE3CQ15386 1083 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CTC1Q2NKJ3 1217 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 HSP90AB4PQ58FF6 505 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 C20orf194Q5TEA3 1177 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 GIMAP6Q6P9H5 292 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CTR9Q6PD62 1173 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 LRRC8DQ7L1W4 858 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TMEM57Q8N5G2 664 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 OR6J1Q8NGC5 347 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PANK1Q8TE04 598 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CHURC1Q8WUH1 139 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 GMCL1Q96IK5 515 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TRERF1Q96PN7 1200 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 WDR11Q9BZH6 1224 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.54□□□□□ -1.045e-7■■■□□ 18.4
CDK5RAP3-209ENST00000578663 ZNF287Q9HBT7 754 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CLIP2Q9UDT6 1046 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 INSL6Q9Y581 213 aa8.54□□□□□ -1.04
CDK5RAP3-209ENST00000578663 DCDC2BA2VCK2 349 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TTLL1O95922 423 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 HTRA4P83105 476 aaPredicted RBP8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SMAD4Q13485 552 aaKnown RBP8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 GPNMBQ14956 572 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PPP2R5BQ15173 497 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TMEM63BQ5T3F8 832 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 EEPD1Q7L9B9 569 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 BANK1Q8NDB2 785 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 KCNG4Q8TDN1 519 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CEP95Q96GE4 821 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CTAGE1Q96RT6 745 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CRBNQ96SW2 442 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 DNAJC2Q99543 621 aaKnown RBP8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 NSUN3Q9H649 340 aaKnown RBP8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MKNK2Q9HBH9 465 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PAG1Q9NWQ8 432 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MTMR4Q9NYA4 1195 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SUPT16HQ9Y5B9 1047 aaKnown RBP8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SLC4A4Q9Y6R1 1079 aa8.53□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TEP1Q99973 2627 aaKnown RBP8.52□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TMEM232C9JQI7 657 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 CENPBP07199 599 aaPredicted RBP8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 ALAS1P13196 640 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 ALDH5A1P51649 535 aaPredicted RBP8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 DMWDQ09019 674 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 IKBKEQ14164 716 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 PTGISQ16647 500 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 PPP4R3BQ5MIZ7 849 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 SLFN13Q68D06 897 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 FTSJ3Q8IY81 847 aaKnown RBP8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 CLASRPQ8N2M8 674 aaKnown RBP8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 SCFD2Q8WU76 684 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 STAG1Q8WVM7 1258 aa8.52□□□□□ -1.05
CDK5RAP3-209ENST00000578663 C17orf80Q9BSJ5 609 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms