RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 ATP11BQ9Y2G3 1177 aa15.74■□□□□ 0.11
CSNK1D-208ENST00000578501 NID2Q14112 1375 aa15.74■□□□□ 0.11
CSNK1D-208ENST00000578501 FRMPD4Q14CM0 1322 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 GOLGA8AA7E2F4 631 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 GOLGA8BA8MQT2 603 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 TNFRSF10AO00220 468 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 EIF2AK2P19525 551 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 TRIM60Q495X7 471 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 CCDC62Q6P9F0 684 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 ANKRD33Q7Z3H0 272 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 VSIG10LQ86VR7 867 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 CCDC82Q8N4S0 544 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 BRF1Q92994 677 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 TOX2Q96NM4 488 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
CSNK1D-208ENST00000578501 CNTNAP5Q8WYK1 1306 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 MEIS2O14770 477 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 TXNP10599 105 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 CPT1AP50416 773 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 METAP2P50579 478 aaKnown RBP eCLIP15.72■□□□□ 0.119e-6■□□□□ 8.1
CSNK1D-208ENST00000578501 BEX3Q00994 111 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 APOBRQ0VD83 1088 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 PGM5Q15124 567 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 C9orf50Q5SZB4 431 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 CUL5Q93034 780 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 SEZ6LQ9BYH1 1024 aa15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 TTYH1Q9H313 450 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 PRDM5Q9NQX1 630 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-208ENST00000578501 MROH7Q68CQ1 1323 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 A0A0U1RQG5 324 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 hCG_1984214I3L0E3 225 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 STAM2O75886 525 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 PTGS1P23219 599 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 CDC27P30260 824 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 CDK7P50613 346 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 ANAPC15P60006 121 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 TLE2Q04725 743 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 BRDTQ58F21 947 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 KCNV1Q6PIU1 500 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 SEPT14Q6ZU15 432 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 FCHSD1Q86WN1 690 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 OR6J1Q8NGC5 347 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 BADQ92934 168 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 PSTPIP2Q9H939 334 aa15.71■□□□□ 0.11
CSNK1D-208ENST00000578501 VCANP13611 3396 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 A6NJR5 290 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 ARVCFO00192 962 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 KPNA6O60684 536 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 ARIH2O95376 493 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 TGFB3P10600 412 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 CCND2P30279 289 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 ADD1P35611 737 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 PPP1R18Q6NYC8 613 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 XRRA1Q6P2D8 792 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 CXCL17Q6UXB2 119 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 HEATR3Q7Z4Q2 680 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 SLC43A3Q8NBI5 491 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 SMARCC2Q8TAQ2 1214 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 EMID1Q96A84 441 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 IL17RAQ96F46 866 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 DDX41Q9UJV9 622 aaKnown RBP15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 NAP1L2Q9ULW6 460 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 V9GY48 417 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-208ENST00000578501 hCG_1642624A0A1W2PR95 340 aa15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 DCDC2CA8MYV0 355 aa15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 RGS20O76081 388 aa15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 MYCLP12524 364 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 TOB2Q14106 344 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 LY6KQ17RY6 165 aa15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 USP17L6PQ6QN14 398 aa15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 IL31RAQ8NI17 732 aa15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 PDLIM7Q9NR12 457 aa15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 MRVI1Q9Y6F6 885 aa15.69■□□□□ 0.1
CSNK1D-208ENST00000578501 KIAA0355O15063 1070 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 PQBP1O60828 265 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 GH1P01241 217 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 CLTBP09497 229 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 PURAQ00577 322 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 ARHGAP1Q07960 439 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 FAAP100Q0VG06 881 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 PCNX4Q63HM2 1172 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 WWC2Q6AWC2 1192 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 COPS5Q92905 334 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 ZNF274Q96GC6 653 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 GLT8D2Q9H1C3 349 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 ALDH8A1Q9H2A2 487 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 BARHL2Q9NY43 387 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 GRIN2DO15399 1336 aa15.68■□□□□ 0.1
CSNK1D-208ENST00000578501 KIAA1217Q5T5P2 1943 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 LTBP2Q14767 1821 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 TRIM43BA6NCK2 446 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 STXBP3O00186 592 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 PRPF3O43395 683 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 ICAM3P32942 547 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 MRPS9P82933 396 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 ITGA7Q13683 1181 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms