RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 RBL2Q08999 1139 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 GRB10Q13322 594 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 QRICH1Q2TAL8 776 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 CHST3Q7LGC8 479 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 CCDC155Q8N6L0 562 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 IWS1Q96ST2 819 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 RMDN3Q96TC7 470 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 LCHNA4D1U4 455 aa24.53■■□□□ 1.52
TSEN54-205ENST00000578415 TLL1O43897 1013 aa24.53■■□□□ 1.52
TSEN54-205ENST00000578415 CASTP20810 708 aaKnown RBP24.53■■□□□ 1.52
TSEN54-205ENST00000578415 KCNJ6P48051 423 aa24.53■■□□□ 1.52
TSEN54-205ENST00000578415 MFAP1P55081 439 aaKnown RBP24.53■■□□□ 1.52
TSEN54-205ENST00000578415 STXBP2Q15833 593 aa24.53■■□□□ 1.52
TSEN54-205ENST00000578415 LRRC8DQ7L1W4 858 aa24.53■■□□□ 1.52
TSEN54-205ENST00000578415 TMCO2Q7Z6W1 182 aaPredicted RBP24.53■■□□□ 1.52
TSEN54-205ENST00000578415 IQCA1Q86XH1 822 aa24.53■■□□□ 1.52
TSEN54-205ENST00000578415 KAT14Q9H8E8 782 aa24.53■■□□□ 1.52
TSEN54-205ENST00000578415 GTF2IRD1Q9UHL9 959 aa24.53■■□□□ 1.52
TSEN54-205ENST00000578415 DDX41Q9UJV9 622 aaKnown RBP24.53■■□□□ 1.52
TSEN54-205ENST00000578415 TCF20Q9UGU0 1960 aaKnown RBP24.53■■□□□ 1.52
TSEN54-205ENST00000578415 RBAK-RBAKDNI3L0D1 243 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 CXCL10P02778 98 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 NT5C2P49902 561 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 DEFB103AP81534 67 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 TCTN1Q2MV58 587 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 ASPRV1Q53RT3 343 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 CCDC178Q5BJE1 867 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 MCF2L2Q86YR7 1114 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 ENAHQ8N8S7 591 aaPredicted RBP24.52■■□□□ 1.52
TSEN54-205ENST00000578415 EMID1Q96A84 441 aaPredicted RBP24.52■■□□□ 1.52
TSEN54-205ENST00000578415 ZSCAN10Q96SZ4 725 aaPredicted RBP24.52■■□□□ 1.52
TSEN54-205ENST00000578415 HDAC6Q9UBN7 1215 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 COG5Q9UP83 839 aa24.52■■□□□ 1.52
TSEN54-205ENST00000578415 B4E1Z4 1266 aa24.51■■□□□ 1.51
TSEN54-205ENST00000578415 NBNO60934 754 aa24.51■■□□□ 1.51
TSEN54-205ENST00000578415 CKBP12277 381 aa24.51■■□□□ 1.51
TSEN54-205ENST00000578415 EIF2AK2P19525 551 aaKnown RBP24.51■■□□□ 1.51
TSEN54-205ENST00000578415 DGKDQ16760 1214 aa24.51■■□□□ 1.51
TSEN54-205ENST00000578415 FBXO11Q86XK2 927 aa24.51■■□□□ 1.51
TSEN54-205ENST00000578415 JMJD4Q9H9V9 463 aa24.51■■□□□ 1.51
TSEN54-205ENST00000578415 MRPL11Q9Y3B7 192 aaKnown RBP24.51■■□□□ 1.51
TSEN54-205ENST00000578415 PSEN2P49810 448 aa24.5■■□□□ 1.51
TSEN54-205ENST00000578415 ARHGEF16Q5VV41 709 aa24.5■■□□□ 1.51
TSEN54-205ENST00000578415 CNKSR3Q6P9H4 555 aa24.5■■□□□ 1.51
TSEN54-205ENST00000578415 PXMP2Q9NR77 195 aa24.5■■□□□ 1.51
TSEN54-205ENST00000578415 PTPRSQ13332 1948 aa24.5■■□□□ 1.51
TSEN54-205ENST00000578415 HAS3O00219 553 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 OPLAHO14841 1288 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 EIF3JO75822 258 aaKnown RBP24.49■■□□□ 1.51
TSEN54-205ENST00000578415 PARNO95453 639 aaKnown RBP24.49■■□□□ 1.51
TSEN54-205ENST00000578415 F2P00734 622 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 NR3C2P08235 984 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 ZNF286BP0CG31 522 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 TRAF7Q6Q0C0 670 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 CWC27Q6UX04 472 aaKnown RBP24.49■■□□□ 1.51
TSEN54-205ENST00000578415 SMC5Q8IY18 1101 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 C7orf31Q8N865 590 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 WNT8BQ93098 351 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 VAT1LQ9HCJ6 419 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 ZSWIM5Q9P217 1185 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 MRVI1Q9Y6F6 885 aa24.49■■□□□ 1.51
TSEN54-205ENST00000578415 DHX16O60231 1041 aaKnown RBP24.48■■□□□ 1.51
TSEN54-205ENST00000578415 PARP1P09874 1014 aaKnown RBP24.48■■□□□ 1.51
TSEN54-205ENST00000578415 TRIP12Q14669 1992 aaPredicted RBP24.48■■□□□ 1.51
TSEN54-205ENST00000578415 LAMA4Q16363 1823 aa24.48■■□□□ 1.51
TSEN54-205ENST00000578415 TRIM71Q2Q1W2 868 aaKnown RBP24.48■■□□□ 1.51
TSEN54-205ENST00000578415 PLEKHM2Q8IWE5 1019 aa24.48■■□□□ 1.51
TSEN54-205ENST00000578415 PPTC7Q8NI37 304 aa24.48■■□□□ 1.51
TSEN54-205ENST00000578415 HLA-CQ95604 372 aa24.48■■□□□ 1.51
TSEN54-205ENST00000578415 ALG1Q9BT22 464 aa24.48■■□□□ 1.51
TSEN54-205ENST00000578415 C1QTNF1Q9BXJ1 281 aa24.48■■□□□ 1.51
TSEN54-205ENST00000578415 GJB5O95377 273 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 CFBP00751 764 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 HOXD8P13378 290 aaPredicted RBP24.47■■□□□ 1.51
TSEN54-205ENST00000578415 HSD17B4P51659 736 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 GHRHRQ02643 423 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 LAMC2Q13753 1193 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 MFSD10Q14728 455 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 KIAA0753Q2KHM9 967 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 B4GALNT3Q6L9W6 998 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 STAG2Q8N3U4 1231 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 GDPD5Q8WTR4 605 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 ZBED2Q9BTP6 218 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 KATNAL1Q9BW62 490 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 OSBPL3Q9H4L5 887 aa24.47■■□□□ 1.51
TSEN54-205ENST00000578415 COL4A4P53420 1690 aaPredicted RBP24.46■■□□□ 1.51
TSEN54-205ENST00000578415 ABHD14A-ACY1A0A1B0GW23 586 aa24.46■■□□□ 1.51
TSEN54-205ENST00000578415 RGS20O76081 388 aa24.46■■□□□ 1.51
TSEN54-205ENST00000578415 ZNF200P98182 395 aaPredicted RBP24.46■■□□□ 1.51
TSEN54-205ENST00000578415 PTK7Q13308 1070 aa24.46■■□□□ 1.51
TSEN54-205ENST00000578415 MBTPS1Q14703 1052 aa24.46■■□□□ 1.51
TSEN54-205ENST00000578415 DSCC1Q9BVC3 393 aa24.46■■□□□ 1.51
TSEN54-205ENST00000578415 DIAPH3Q9NSV4 1193 aa24.46■■□□□ 1.51
TSEN54-205ENST00000578415 KIAA1217Q5T5P2 1943 aa24.45■■□□□ 1.51
TSEN54-205ENST00000578415 PPP1R11O60927 126 aaPredicted RBP24.45■■□□□ 1.5
TSEN54-205ENST00000578415 HIC1Q14526 733 aa24.45■■□□□ 1.5
TSEN54-205ENST00000578415 ZNF618Q5T7W0 954 aa24.45■■□□□ 1.5
TSEN54-205ENST00000578415 CHD1LQ86WJ1 897 aa24.45■■□□□ 1.5
TSEN54-205ENST00000578415 DHX37Q8IY37 1157 aaKnown RBP24.45■■□□□ 1.5
TSEN54-205ENST00000578415 RAD9AQ99638 391 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms