RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ARHGAP1Q07960 439 aa26.53■■□□□ 1.84
VAPA-205ENST00000578314 ERICH6BQ5W0A0 696 aa26.53■■□□□ 1.84
VAPA-205ENST00000578314 SYNE3Q6ZMZ3 975 aa26.53■■□□□ 1.84
VAPA-205ENST00000578314 TMTC3Q6ZXV5 915 aa26.53■■□□□ 1.84
VAPA-205ENST00000578314 FCHSD1Q86WN1 690 aa26.53■■□□□ 1.84
VAPA-205ENST00000578314 MYH6P13533 1939 aa26.53■■□□□ 1.84
VAPA-205ENST00000578314 MYCLP12524 364 aaPredicted RBP26.52■■□□□ 1.84
VAPA-205ENST00000578314 APOA5Q6Q788 366 aa26.52■■□□□ 1.84
VAPA-205ENST00000578314 RAB11FIP4Q86YS3 637 aa26.52■■□□□ 1.84
VAPA-205ENST00000578314 EMID1Q96A84 441 aaPredicted RBP26.52■■□□□ 1.84
VAPA-205ENST00000578314 TCEANC2Q96MN5 208 aa26.52■■□□□ 1.84
VAPA-205ENST00000578314 ALDH8A1Q9H2A2 487 aaPredicted RBP26.52■■□□□ 1.84
VAPA-205ENST00000578314 MTMR10Q9NXD2 777 aa26.52■■□□□ 1.84
VAPA-205ENST00000578314 PIK3CDO00329 1044 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 KCNV1Q6PIU1 500 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 MICU3Q86XE3 530 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 IL31RAQ8NI17 732 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 AFG1LQ8WV93 481 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 TRPV6Q9H1D0 765 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 PPP4R2Q9NY27 417 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 BRPF3Q9ULD4 1205 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 MRVI1Q9Y6F6 885 aa26.51■■□□□ 1.83
VAPA-205ENST00000578314 FRMPD4Q14CM0 1322 aa26.5■■□□□ 1.83
VAPA-205ENST00000578314 B4GALT4O60513 344 aa26.5■■□□□ 1.83
VAPA-205ENST00000578314 CCND2P30279 289 aa26.5■■□□□ 1.83
VAPA-205ENST00000578314 RBM28Q9NW13 759 aaKnown RBP26.5■■□□□ 1.83
VAPA-205ENST00000578314 MEIS2O14770 477 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 REC8O95072 547 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 MMP3P08254 477 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 TGFB3P10600 412 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 LAMC2Q13753 1193 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 NBPF20Q3BBV1 942 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 NFRKBQ6P4R8 1299 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 TMEM199Q8N511 208 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 SNX14Q9Y5W7 946 aa26.49■■□□□ 1.83
VAPA-205ENST00000578314 ZBTB43O43298 467 aa26.48■■□□□ 1.83
VAPA-205ENST00000578314 SUPT20HL2P0C7V6 817 aa26.48■■□□□ 1.83
VAPA-205ENST00000578314 PPIGQ13427 754 aaKnown RBP eCLIP26.48■■□□□ 1.83
VAPA-205ENST00000578314 FAM109BQ6ICB4 259 aaPredicted RBP26.48■■□□□ 1.83
VAPA-205ENST00000578314 USP17L6PQ6QN14 398 aa26.48■■□□□ 1.83
VAPA-205ENST00000578314 CCDC82Q8N4S0 544 aa26.48■■□□□ 1.83
VAPA-205ENST00000578314 CUL5Q93034 780 aa26.48■■□□□ 1.83
VAPA-205ENST00000578314 PPP1R12CQ9BZL4 782 aa26.48■■□□□ 1.83
VAPA-205ENST00000578314 EPB41L2O43491 1005 aaKnown RBP26.47■■□□□ 1.83
VAPA-205ENST00000578314 STAM2O75886 525 aa26.47■■□□□ 1.83
VAPA-205ENST00000578314 RCAN1P53805 252 aa26.47■■□□□ 1.83
VAPA-205ENST00000578314 PTPN11Q06124 597 aaPredicted RBP26.47■■□□□ 1.83
VAPA-205ENST00000578314 PPTC7Q8NI37 304 aa26.47■■□□□ 1.83
VAPA-205ENST00000578314 SMARCC2Q8TAQ2 1214 aa26.47■■□□□ 1.83
VAPA-205ENST00000578314 NOC4LQ9BVI4 516 aaKnown RBP26.47■■□□□ 1.83
VAPA-205ENST00000578314 HIPK3Q9H422 1215 aa26.47■■□□□ 1.83
VAPA-205ENST00000578314 PSTPIP2Q9H939 334 aa26.47■■□□□ 1.83
VAPA-205ENST00000578314 STXBP5LQ9Y2K9 1186 aa26.47■■□□□ 1.83
VAPA-205ENST00000578314 hCG_1642624A0A1W2PR95 340 aa26.46■■□□□ 1.83
VAPA-205ENST00000578314 CSF2RAP15509 400 aa26.46■■□□□ 1.83
VAPA-205ENST00000578314 CASTP20810 708 aaKnown RBP26.46■■□□□ 1.83
VAPA-205ENST00000578314 CYP2C18P33260 490 aa26.46■■□□□ 1.83
VAPA-205ENST00000578314 MRPS9P82933 396 aaKnown RBP26.46■■□□□ 1.83
VAPA-205ENST00000578314 FUT2Q10981 343 aa26.46■■□□□ 1.83
VAPA-205ENST00000578314 DGKDQ16760 1214 aa26.46■■□□□ 1.83
VAPA-205ENST00000578314 MYSM1Q5VVJ2 828 aa26.46■■□□□ 1.83
VAPA-205ENST00000578314 C16orf59Q7L2K0 433 aa26.46■■□□□ 1.83
VAPA-205ENST00000578314 DHX37Q8IY37 1157 aaKnown RBP26.46■■□□□ 1.83
VAPA-205ENST00000578314 JAKMIP1Q96N16 626 aaKnown RBP26.46■■□□□ 1.83
VAPA-205ENST00000578314 TRMT13Q9NUP7 481 aaKnown RBP26.46■■□□□ 1.83
VAPA-205ENST00000578314 KLF18A0A0U1RQI7 1052 aa26.45■■□□□ 1.82
VAPA-205ENST00000578314 CPA1P15085 419 aa26.45■■□□□ 1.82
VAPA-205ENST00000578314 RTN1Q16799 776 aa26.45■■□□□ 1.82
VAPA-205ENST00000578314 CELF3Q5SZQ8 465 aaKnown RBP26.45■■□□□ 1.82
VAPA-205ENST00000578314 XRRA1Q6P2D8 792 aa26.45■■□□□ 1.82
VAPA-205ENST00000578314 FBXL16Q8N461 479 aa26.45■■□□□ 1.82
VAPA-205ENST00000578314 KAT2BQ92831 832 aa26.45■■□□□ 1.82
VAPA-205ENST00000578314 ZFP91Q96JP5 570 aaPredicted RBP26.45■■□□□ 1.82
VAPA-205ENST00000578314 INPP4AQ96PE3 977 aaPredicted RBP26.45■■□□□ 1.82
VAPA-205ENST00000578314 FAM217BQ9NTX9 383 aaPredicted RBP26.45■■□□□ 1.82
VAPA-205ENST00000578314 HOXD8P13378 290 aaPredicted RBP26.44■■□□□ 1.82
VAPA-205ENST00000578314 ICAM3P32942 547 aa26.44■■□□□ 1.82
VAPA-205ENST00000578314 SP2Q02086 613 aa26.44■■□□□ 1.82
VAPA-205ENST00000578314 BLOC1S2Q6QNY1 142 aa26.44■■□□□ 1.82
VAPA-205ENST00000578314 RNPC3Q96LT9 517 aaKnown RBP26.44■■□□□ 1.82
VAPA-205ENST00000578314 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.44■■□□□ 1.827e-7■■□□□ 13.4
VAPA-205ENST00000578314 UMODL1Q5DID0 1318 aa26.43■■□□□ 1.82
VAPA-205ENST00000578314 PPFIA4O75335 1185 aa26.43■■□□□ 1.82
VAPA-205ENST00000578314 GNPTABQ3T906 1256 aa26.43■■□□□ 1.82
VAPA-205ENST00000578314 TMEM240Q5SV17 173 aa26.43■■□□□ 1.82
VAPA-205ENST00000578314 PCNX4Q63HM2 1172 aa26.43■■□□□ 1.82
VAPA-205ENST00000578314 SLC17A8Q8NDX2 589 aa26.43■■□□□ 1.82
VAPA-205ENST00000578314 GPKOWQ92917 476 aaPredicted RBP eCLIP26.43■■□□□ 1.822e-7■■■□□ 18.7
VAPA-205ENST00000578314 CNTNAP5Q8WYK1 1306 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 SCN10AQ9Y5Y9 1956 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 GOLGA8AA7E2F4 631 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 GOLGA8BA8MQT2 603 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 SPATA31C2B4DYI2 1134 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 GGPS1O95749 300 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 UBA1P22314 1058 aaKnown RBP26.42■■□□□ 1.82
VAPA-205ENST00000578314 PSMA5P28066 241 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 SMAD3P84022 425 aaKnown RBP26.42■■□□□ 1.82
VAPA-205ENST00000578314 FGD1P98174 961 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 FAM47CQ5HY64 1035 aa26.42■■□□□ 1.82
VAPA-205ENST00000578314 Q6ZUG5 572 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms