RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 KIF17Q9P2E2 1029 aa9.57□□□□□ -0.88
CDH8-203ENST00000577390 KRT8P05787 483 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 LDHBP07195 334 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 TPCN1Q9ULQ1 816 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 UBE3AQ05086 875 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 PHLDB3Q6NSJ2 640 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 A6NJR5 290 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 PRR23D1E9PI22 279 aaPredicted RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 PRR23D2P0DMB1 279 aaPredicted RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 DNMT1P26358 1616 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 CWF19L2Q2TBE0 894 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 DTHD1Q6ZMT9 781 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 L2HGDHQ9H9P8 463 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 AKT3Q9Y243 479 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 CARSP49589 748 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 YWHAEP62258 255 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 TSPY1Q01534 308 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 YWHAHQ04917 246 aaPredicted RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 BFSP1Q12934 665 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 SARM1Q6SZW1 724 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 PPP2R3CQ969Q6 453 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 HPS4Q9NQG7 708 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 IFNB1P01574 187 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 VCAM1P19320 739 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 EEF1DP29692 281 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 LEMD2Q8NC56 503 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 RBM17Q96I25 401 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 DISC1Q9NRI5 854 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 CADPSQ9ULU8 1353 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 GCNT3O95395 438 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 SERPIND1P05546 499 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 CTCFP49711 727 aaPredicted RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 RRM2BQ7LG56 351 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 ADAT2Q7Z6V5 191 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 PLEKHM2Q8IWE5 1019 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 OTUB1Q96FW1 271 aaPredicted RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 OLFM3Q96PB7 478 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 THUMPD2Q9BTF0 503 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 CNOT10Q9H9A5 744 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 TUBA8Q9NY65 449 aaPredicted RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 KIAA1468Q9P260 1216 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 TRAF5O00463 557 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 PARP1P09874 1014 aaKnown RBP9.56□□□□□ -0.88
CDH8-203ENST00000577390 FANCCQ00597 558 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 DCAF4L1Q3SXM0 396 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 KRT27Q7Z3Y8 459 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 DRC3Q9H069 523 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 CD248Q9HCU0 757 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 ZNF446Q9NWS9 450 aa9.56□□□□□ -0.88
CDH8-203ENST00000577390 GUCA1AP43080 201 aaPredicted RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 MECOMQ03112 1051 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 BRAPQ7Z569 592 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 SCG3Q8WXD2 468 aaKnown RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 TRIM11Q96F44 468 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 SUGCTQ9HAC7 445 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 TXLNGQ9NUQ3 528 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 CFAP73A6NFT4 308 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 RSPH10B2B2RC85 870 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 RSPH10BP0C881 870 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 PCYT1AP49585 367 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 CCNHP51946 323 aaPredicted RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 CEP85Q6P2H3 762 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 IL16Q14005 1332 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 TESPA1A2RU30 521 aaPredicted RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 GPC4O75487 556 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 TMPOP42166 694 aaKnown RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 GOLGA8FQ08AF8 430 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 GOLGA8DPQ0D2H9 430 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 IQCDQ96DY2 449 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 ESYT1Q9BSJ8 1104 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 TMEM106CQ9BVX2 250 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 TLR3O15455 904 aaKnown RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 ZBTB43O43298 467 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 MYL5Q02045 173 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 PCDHB13Q9Y5F0 798 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 SAMD9Q5K651 1589 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 MYO9BQ13459 2157 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 GNAT1P11488 350 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 TSHZ1Q6ZSZ6 1077 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 NT5DC4Q86YG4 428 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 ZNF483Q8TF39 744 aaPredicted RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 NCLNQ969V3 563 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 DHX58Q96C10 678 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 FRMD6Q96NE9 622 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 SNAPC4Q5SXM2 1469 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 PPARGP37231 505 aaPredicted RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 PABPC4Q13310 644 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDH8-203ENST00000577390 DIS3LQ8TF46 1054 aaKnown RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 MAGEB10Q96LZ2 347 aaPredicted RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 CSRNP1Q96S65 589 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 PPIEQ9UNP9 301 aaKnown RBP9.55□□□□□ -0.88
CDH8-203ENST00000577390 GOLGA8RI6L899 631 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 TIPRLO75663 272 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 DDHD2O94830 711 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 RAPGEF3O95398 923 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 KRT17Q04695 432 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 NLRP7Q8WX94 980 aa9.55□□□□□ -0.88
CDH8-203ENST00000577390 ZFATQ9P243 1243 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms