RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	ATP2C2	O75185	946 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	KRT14	P02533	472 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	TM4SF1	P30408	202 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	MAP9	Q49MG5	647 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	TBC1D5	Q92609	795 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	HAUS4	Q9H6D7	363 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	CD209	Q9NNX6	404 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	DDX4	Q9NQI0	724 aa	Known RBP	16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	RRP15	Q9Y3B9	282 aa	Known RBP	16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	POTEF	A5A3E0	1075 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	ZBTB39	O15060	712 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	POTEI	P0CG38	1075 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	COPB2	P35606	906 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	EPS15	P42566	896 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	CCT5	P48643	541 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	NFIA	Q12857	509 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	WHAMMP3	Q1A5X7	153 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	POTEG	Q6S5H5	508 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	POTEE	Q6S8J3	1075 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	KIAA0825	Q8IV33	1275 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	LARP4B	Q92615	738 aa	Known RBP	16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	PNMA5	Q96PV4	448 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	BLOC1S4	Q9NUP1	217 aa		16.43	■□□□□ 0.22
PRPF8-216	ENST00000577001	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	SRGN	P10124	158 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	TICAM2	Q86XR7	235 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	OR2W6P	Q8NHA6	318 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	ARL8A	Q96BM9	186 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	AP1M1	Q9BXS5	423 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	RBM12	Q9NTZ6	932 aa	Known RBP	16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	FEZ2	Q9UHY8	353 aa	Predicted RBP	16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	LRRC10B	A6NIK2	292 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	FAM153B	P0C7A2	387 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	HPD	P32754	393 aa	Predicted RBP	16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	ACTN2	P35609	894 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	FAM153C	Q494X1	144 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	TSEN2	Q8NCE0	465 aa	Known RBP	16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	DBNDD1	Q9H9R9	158 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	POLL	Q9UGP5	575 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	FAM153A	Q9UHL3	310 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	NFU1	Q9UMS0	254 aa		16.42	■□□□□ 0.22
PRPF8-216	ENST00000577001	RHOBTB3	O94955	611 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	SYF2	O95926	243 aa	Known RBP	16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	PSMC6	P62333	389 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	DGKH	Q86XP1	1220 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	UHMK1	Q8TAS1	419 aa	Known RBP	16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	CYP2W1	Q8TAV3	490 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	NHSL1	Q5SYE7	1610 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	FLT1	P17948	1338 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	KRT83	P78385	493 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	GUCY2D	Q02846	1103 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	KCNA1	Q09470	495 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	PALM3	A6NDB9	673 aa	Predicted RBP	16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	HLTF	Q14527	1009 aa	Known RBP eCLIP	16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	PPP2R5B	Q15173	497 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	TRAPPC3L	Q5T215	181 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	KRT79	Q5XKE5	535 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	LRRC31	Q6UY01	552 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	KRT12	Q99456	494 aa		16.41	■□□□□ 0.22
PRPF8-216	ENST00000577001	PRPF6	O94906	941 aa	Known RBP	16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	LIG3	P49916	1009 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	PDCL	Q13371	301 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	VWA3B	Q502W6	1294 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	AFAP1L1	Q8TED9	768 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	ANKRD2	Q9GZV1	360 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	HPCAL4	Q9UM19	191 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	PDS5A	Q29RF7	1337 aa	Known RBP	16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	SMIM23	A6NLE4	172 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	RSPH10B2	B2RC85	870 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	PPP1R11	O60927	126 aa	Predicted RBP	16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	RSPH10B	P0C881	870 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	CARS	P49589	748 aa	Known RBP	16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	ZBED6	P86452	979 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	PRPF4B	Q13523	1007 aa	Known RBP	16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	NBPF9	Q3BBW0	867 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	PRR16	Q569H4	304 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	ARL6IP4	Q66PJ3	421 aa	Known RBP	16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	CCDC84	Q86UT8	332 aa	Predicted RBP	16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	MSANTD4	Q8NCY6	345 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	CCDC51	Q96ER9	411 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	NARF	Q9UHQ1	456 aa		16.4	■□□□□ 0.22
PRPF8-216	ENST00000577001	ADCY7	P51828	1080 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	CASP5	P51878	434 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	ZNF804A	Q7Z570	1209 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	DNAJC7	Q99615	494 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	RTFDC1	Q9BY42	306 aa	Predicted RBP	16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	EPB41L5	Q9HCM4	733 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	PCDHB13	Q9Y5F0	798 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	GOLGA6B	A6NDN3	693 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	TACC1	O75410	805 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	PALM	O75781	387 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	SLC9A1	P19634	815 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	EEF1G	P26641	437 aa	Known RBP	16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	TRAPPC10	P48553	1259 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	ADGRF4	Q8IZF3	695 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	PIGO	Q8TEQ8	1089 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	USP40	Q9NVE5	1235 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	ITGB4	P16144	1822 aa		16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	PARP4	Q9UKK3	1724 aa	Known RBP	16.39	■□□□□ 0.21
PRPF8-216	ENST00000577001	DDX39A	O00148	427 aa	Known RBP	16.39	■□□□□ 0.21

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms