RNA–Protein interactions for RNA: ENST00000576513.2

SLC12A4-218, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-218ENST00000576513 SMCO2A6NFE2 343 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 WDR46O15213 610 aaKnown RBP15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 SPTLC2O15270 562 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 GADD45BO75293 160 aaPredicted RBP15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 SLC16A2P36021 539 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 TOB1P50616 345 aaPredicted RBP15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 STAT2P52630 851 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 ADALQ6DHV7 355 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 TYW1BQ6NUM6 668 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 NCAPG2Q86XI2 1143 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 HOMER1Q86YM7 354 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 ABRAQ8N0Z2 381 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 TRPV1Q8NER1 839 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 PIBF1Q8WXW3 757 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 GPKOWQ92917 476 aaPredicted RBP eCLIP15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 GUCD1Q96NT3 240 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 CLIC4Q9Y696 253 aa15.37■□□□□ 0.05
SLC12A4-218ENST00000576513 A0A1W2PQ27 194 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 A0A1W2PQ64 194 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 A0A1W2PQD8 194 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 RAD21O60216 631 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 FLOT1O75955 427 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 FDX1P10109 184 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 FCER1AP12319 257 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 MRPL12P52815 198 aaKnown RBP15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 STK38Q15208 465 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 PTPAQ15257 358 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 SF3A1Q15459 793 aaKnown RBP15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 KIAA1755Q5JYT7 1200 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 KRT25Q7Z3Z0 450 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 COL25A1Q9BXS0 654 aaPredicted RBP15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 RIC8AQ9NPQ8 531 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 PNMA2Q9UL42 364 aa15.36■□□□□ 0.05
SLC12A4-218ENST00000576513 SLC25A27O95847 323 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 DSG3P32926 999 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 SHHQ15465 462 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 QRICH1Q2TAL8 776 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 TRIM60Q495X7 471 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 FAM83BQ5T0W9 1011 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 PGBD1Q96JS3 809 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 PRR12Q9ULL5 1215 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 ZNF236Q9UL36 1845 aa15.35■□□□□ 0.05
SLC12A4-218ENST00000576513 UNC80Q8N2C7 3258 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 DNAH12Q6ZR08 3092 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 COBLO75128 1261 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 LETM1O95202 739 aaPredicted RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 IGHA2P01877 340 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 RARBP10826 455 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 ADCYAP1R1P41586 468 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 CEBPZQ03701 1054 aaKnown RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 IKQ13123 557 aaPredicted RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 ORC2Q13416 577 aaPredicted RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 CDC37Q16543 378 aaPredicted RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 C1orf53Q5VUE5 145 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 FBXO11Q86XK2 927 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 SPICE1Q8N0Z3 855 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 BADQ92934 168 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 NUP88Q99567 741 aaPredicted RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 RANBP17Q9H2T7 1088 aaKnown RBP15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 NRBP1Q9UHY1 535 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 PCDHA7Q9UN72 937 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 PCDHA1Q9Y5I3 950 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 RLFQ13129 1914 aa15.34■□□□□ 0.05
SLC12A4-218ENST00000576513 CCDC194A0A1B0GVG4 234 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 PPP1R11O60927 126 aaPredicted RBP15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 ME1P48163 572 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 ADCY7P51828 1080 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 SMAD3P84022 425 aaKnown RBP15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 KCTD2Q14681 263 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 SNX17Q15036 470 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 LRRC41Q15345 812 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 RNF180Q86T96 592 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 REXO1Q8N1G1 1221 aaKnown RBP15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 ZNF579Q8NAF0 562 aaKnown RBP15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 CUL5Q93034 780 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 FERMT2Q96AC1 680 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 MAML3Q96JK9 1138 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 CDX2Q99626 313 aaPredicted RBP15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 FTOQ9C0B1 505 aaKnown RBP eCLIP15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 XPNPEP3Q9NQH7 507 aa15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 ISY1Q9ULR0 285 aaKnown RBP15.33■□□□□ 0.04
SLC12A4-218ENST00000576513 LTBP2Q14767 1821 aa15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 CUTAO60888 179 aa15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 CMA1P23946 247 aa15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 CLK2P49760 499 aaKnown RBP15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 NONOQ15233 471 aaKnown RBP eCLIP15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 EARS2Q5JPH6 523 aaKnown RBP15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 PRAMEF19Q5SWL8 479 aa15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 AXDND1Q5T1B0 1012 aaPredicted RBP15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 PIK3AP1Q6ZUJ8 805 aa15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 SAMD3Q8N6K7 520 aa15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 MAFAQ8NHW3 353 aaPredicted RBP15.32■□□□□ 0.04
SLC12A4-218ENST00000576513 ATG4CQ96DT6 458 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms