RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DUSP10Q9Y6W6 482 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 USP31Q70CQ4 1352 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 ABCC12Q96J65 1359 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 SNX1Q13596 522 aa19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 OTUD6AQ7L8S5 288 aa19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 DDX47Q9H0S4 455 aaKnown RBP19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 USP40Q9NVE5 1235 aa19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 COL4A3BPQ9Y5P4 624 aa19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 H3BQF6 201 aa19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 SRBD1Q8N5C6 995 aaKnown RBP19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 IFT74Q96LB3 600 aa19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 TBK1Q9UHD2 729 aa19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 PLAAQ9Y263 795 aa19.58■□□□□ 0.73
ATPAF1-214ENST00000576409 KRT14P02533 472 aa19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 C6orf163Q5TEZ5 329 aa19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 SPATA4Q8NEY3 305 aa19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 OSBPL9Q96SU4 736 aa19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 MLXIPLQ9NP71 852 aa19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 ZNF446Q9NWS9 450 aa19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 CD44P16070 742 aaKnown RBP19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 SESN3P58005 492 aa19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 ALKBH5Q6P6C2 394 aaKnown RBP19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 CEP83Q9Y592 693 aa19.58■□□□□ 0.72
ATPAF1-214ENST00000576409 CHD1O14646 1710 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 ALDH3A1P30838 453 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 IL6STP40189 918 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 SNAP25P60880 206 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 ILDR1Q86SU0 546 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 DDX12PQ92771 950 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 EIF4E1BA6NMX2 242 aaKnown RBP19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 SORBS3O60504 671 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 ECM2O94769 699 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 PRPF6O94906 941 aaKnown RBP19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 MYCLP12524 364 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 PTPAQ15257 358 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 DOK7Q18PE1 504 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 EPB41L4AQ9HCS5 686 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 TMEM260Q9NX78 707 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 COL3A1P02461 1466 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 ANKRD40Q6AI12 368 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 TAOK1Q7L7X3 1001 aa19.57■□□□□ 0.72
ATPAF1-214ENST00000576409 KIAA0825Q8IV33 1275 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 FAM178BQ8IXR5 827 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 EMILIN3Q9NT22 766 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 ODF2LQ9ULJ1 636 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 DAAM1Q9Y4D1 1078 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 SASH3O75995 380 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 TRIP13Q15645 432 aaPredicted RBP19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 RASGRP2Q7LDG7 609 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 USP37Q86T82 979 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 ISCA1Q9BUE6 129 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 TMEM94Q12767 1356 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 A0A0U1RQJ8 604 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 PGRMC1O00264 195 aaKnown RBP19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 KCNJ6P48051 423 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 FNBP1Q96RU3 617 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 IMPG2Q9BZV3 1241 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 TRIM7Q9C029 511 aa19.56■□□□□ 0.72
ATPAF1-214ENST00000576409 SEMA3EO15041 775 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 VPS37BQ9H9H4 285 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 PDE6BP35913 854 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 ADCY8P40145 1251 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 STK4Q13043 487 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 ZNF526Q8TF50 670 aaPredicted RBP19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 GOLPH3Q9H4A6 298 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 WDR17Q8IZU2 1322 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 GNA14O95837 355 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 BCRP11274 1271 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 EMBQ6PCB8 327 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 MMS22LQ6ZRQ5 1243 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 PCIF1Q9H4Z3 704 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 PALLDQ8WX93 1383 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 OVOS2A0A0J9YW53 1432 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 OVOS2Q6IE36 1432 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 STK36Q9NRP7 1315 aa19.55■□□□□ 0.72
ATPAF1-214ENST00000576409 SNCBQ16143 134 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 ARL6IP4Q66PJ3 421 aaKnown RBP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 TBC1D1Q86TI0 1168 aaPredicted RBP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 SNX24Q9Y343 169 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 GCKP35557 465 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 HHATQ5VTY9 493 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 TRIM65Q6PJ69 517 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 KIFC2Q96AC6 838 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 BCS1LQ9Y276 419 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 GAS7O60861 476 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 PFKFB3Q16875 520 aaPredicted RBP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 CYP4F22Q6NT55 531 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 CARD10Q9BWT7 1032 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 FGGP02679 453 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 DLATP10515 647 aaKnown RBP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 DESP17661 470 aa19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 ZNF211Q13398 564 aaPredicted RBP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 CELF1Q92879 486 aaKnown RBP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 DCP1AQ9NPI6 582 aaPredicted RBP19.54■□□□□ 0.72
ATPAF1-214ENST00000576409 HOMER3Q9NSC5 361 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms