RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 MYOCDQ8IZQ8 938 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 PABPC5Q96DU9 382 aaKnown RBP19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 SEC62Q99442 399 aaKnown RBP19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 ALG1Q9BT22 464 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 UPF3BQ9BZI7 483 aaKnown RBP19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 HDAC6Q9UBN7 1215 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 PRKAG3Q9UGI9 489 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 GTF2IRD1Q9UHL9 959 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 FRMPD2Q68DX3 1309 aaPredicted RBP19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 C5orf42Q9H799 3197 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 B4DLN1 442 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 RANBP6O60518 1105 aaKnown RBP19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 AMHP03971 560 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 MRPL12P52815 198 aaKnown RBP19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 CTDSPL2Q05D32 466 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 RBL2Q08999 1139 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 GPM6BQ13491 265 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 ZNF618Q5T7W0 954 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 BTNL9Q6UXG8 535 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 SEPT14Q6ZU15 432 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 ADHFE1Q8IWW8 467 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 DNERQ8NFT8 737 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 CLDND1Q9NY35 253 aa19.19■□□□□ 0.66
CTDNEP1-211ENST00000575783 TANC1Q9C0D5 1861 aa19.18■□□□□ 0.66
CTDNEP1-211ENST00000575783 C19orf67A6NJJ6 358 aa19.18■□□□□ 0.66
CTDNEP1-211ENST00000575783 LGR5O75473 907 aa19.18■□□□□ 0.66
CTDNEP1-211ENST00000575783 GH1P01241 217 aa19.18■□□□□ 0.66
CTDNEP1-211ENST00000575783 IRS1P35568 1242 aa19.18■□□□□ 0.66
CTDNEP1-211ENST00000575783 MBTPS1Q14703 1052 aa19.18■□□□□ 0.66
CTDNEP1-211ENST00000575783 CCDC62Q6P9F0 684 aa19.18■□□□□ 0.66
CTDNEP1-211ENST00000575783 H3BNC9 293 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 CCER2I3L3R5 266 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 HTRA4P83105 476 aaPredicted RBP19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 ZNF200P98182 395 aaPredicted RBP19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 ARHGAP1Q07960 439 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 PTK7Q13308 1070 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 TRAF7Q6Q0C0 670 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 DBF4BQ8NFT6 615 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 WNT8BQ93098 351 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 MUTYHQ9UIF7 546 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 DDX19BQ9UMR2 479 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 PTPRSQ13332 1948 aa19.17■□□□□ 0.66
CTDNEP1-211ENST00000575783 LCTP09848 1927 aa19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 MS4A1P11836 297 aa19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 PSEN2P49810 448 aa19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 CLUL1Q15846 466 aa19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 DGKDQ16760 1214 aa19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 GPATCH3Q96I76 525 aa19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 SAMD11Q96NU1 681 aa19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 YME1L1Q96TA2 773 aa19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 NSUN3Q9H649 340 aaKnown RBP19.16■□□□□ 0.66
CTDNEP1-211ENST00000575783 CFAP54Q96N23 3096 aa19.15■□□□□ 0.66
CTDNEP1-211ENST00000575783 UPP2O95045 317 aa19.15■□□□□ 0.66
CTDNEP1-211ENST00000575783 TRIM71Q2Q1W2 868 aaKnown RBP19.15■□□□□ 0.66
CTDNEP1-211ENST00000575783 TMEM192Q8IY95 271 aa19.15■□□□□ 0.66
CTDNEP1-211ENST00000575783 SP7Q8TDD2 431 aaPredicted RBP19.15■□□□□ 0.66
CTDNEP1-211ENST00000575783 MYH7P12883 1935 aa19.15■□□□□ 0.66
CTDNEP1-211ENST00000575783 TRIP12Q14669 1992 aaPredicted RBP19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 MFSD10Q14728 455 aa19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 KIAA0753Q2KHM9 967 aa19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 USH1GQ495M9 461 aa19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 DHX37Q8IY37 1157 aaKnown RBP19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 PRSS33Q8NF86 280 aa19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 TMEM47Q9BQJ4 181 aa19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 KATNAL1Q9BW62 490 aa19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 TOMM22Q9NS69 142 aa19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 PNMA2Q9UL42 364 aa19.14■□□□□ 0.65
CTDNEP1-211ENST00000575783 RSPH10B2B2RC85 870 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 ST18O60284 1047 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 RSPH10BP0C881 870 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 ZNF286BP0CG31 522 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 LTBRP36941 435 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 THPOP40225 353 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 NOVP48745 357 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 COL19A1Q14993 1142 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 HERC4Q5GLZ8 1057 aaPredicted RBP19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 IER5LQ5T953 404 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 RPAINQ86UA6 219 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 FBXO11Q86XK2 927 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 RNF135Q8IUD6 432 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 EMSYQ7Z589 1322 aa19.13■□□□□ 0.65
CTDNEP1-211ENST00000575783 TOP1P11387 765 aaKnown RBP19.12■□□□□ 0.65
CTDNEP1-211ENST00000575783 PTPN5P54829 565 aa19.12■□□□□ 0.65
CTDNEP1-211ENST00000575783 TBC1D5Q92609 795 aa19.12■□□□□ 0.65
CTDNEP1-211ENST00000575783 TAAR1Q96RJ0 339 aa19.12■□□□□ 0.65
CTDNEP1-211ENST00000575783 POP1Q99575 1024 aaKnown RBP19.12■□□□□ 0.65
CTDNEP1-211ENST00000575783 NCK2O43639 380 aa19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 DLX2Q07687 328 aaPredicted RBP19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 MKRN4PQ13434 485 aaPredicted RBP19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 HIC1Q14526 733 aa19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 SMAD2Q15796 467 aaKnown RBP19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 STXBP2Q15833 593 aa19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 RRP12Q5JTH9 1297 aaKnown RBP19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 RGS22Q8NE09 1264 aa19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 NSUN6Q8TEA1 469 aaKnown RBP19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 EDAQ92838 391 aa19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 TOP1MTQ969P6 601 aa19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 PBXIP1Q96AQ6 731 aa19.11■□□□□ 0.65
CTDNEP1-211ENST00000575783 DDX41Q9UJV9 622 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms