RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SYN1P17600 705 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 CCT2P78371 535 aaKnown RBP15.26■□□□□ 0.03
RPAIN-216ENST00000575599 TTLL4Q14679 1199 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 PGM5Q15124 567 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 FSCN1Q16658 493 aaKnown RBP15.26■□□□□ 0.03
RPAIN-216ENST00000575599 TRIM60Q495X7 471 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 WWC2Q6AWC2 1192 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 CCSAPQ6IQ19 270 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-216ENST00000575599 USP17L6PQ6QN14 398 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 OR6J1Q8NGC5 347 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 IL31RAQ8NI17 732 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 PDCD2LQ9BRP1 358 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 STARD7Q9NQZ5 370 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 V9GY48 417 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-216ENST00000575599 NID2Q14112 1375 aa15.26■□□□□ 0.03
RPAIN-216ENST00000575599 ARIH2O95376 493 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 TXNP10599 105 aaKnown RBP15.25■□□□□ 0.03
RPAIN-216ENST00000575599 PDIA3P30101 505 aaKnown RBP15.25■□□□□ 0.03
RPAIN-216ENST00000575599 NAPAP54920 295 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 ANAPC15P60006 121 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 LCE2DQ5TA82 110 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-216ENST00000575599 COPS5Q92905 334 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 VTI1AQ96AJ9 217 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 ZFP91Q96JP5 570 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-216ENST00000575599 GLT1D1Q96MS3 346 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 PSTPIP2Q9H939 334 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 Q9Y3F1 56 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 KIAA1217Q5T5P2 1943 aa15.25■□□□□ 0.03
RPAIN-216ENST00000575599 MEIS2O14770 477 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 ZEB2O60315 1214 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 PPFIA3O75145 1194 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 EIF3JO75822 258 aaKnown RBP15.24■□□□□ 0.03
RPAIN-216ENST00000575599 CCND2P30279 289 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 UBE2SQ16763 222 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 CXCL17Q6UXB2 119 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 NCOA5Q9HCD5 579 aaKnown RBP15.24■□□□□ 0.03
RPAIN-216ENST00000575599 PIK3CDO00329 1044 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 NKRFO15226 690 aaKnown RBP eCLIP15.24■□□□□ 0.03
RPAIN-216ENST00000575599 EVCP57679 992 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 NKX3-2P78367 333 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 STK3Q13188 491 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 SNX17Q15036 470 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 LY6KQ17RY6 165 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 TYW1BQ6NUM6 668 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 PHKBQ93100 1093 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 PRDM5Q9NQX1 630 aaPredicted RBP15.24■□□□□ 0.03
RPAIN-216ENST00000575599 MRVI1Q9Y6F6 885 aa15.24■□□□□ 0.03
RPAIN-216ENST00000575599 FRMPD4Q14CM0 1322 aa15.23■□□□□ 0.03
RPAIN-216ENST00000575599 STXBP3O00186 592 aa15.23■□□□□ 0.03
RPAIN-216ENST00000575599 PQBP1O60828 265 aaKnown RBP15.23■□□□□ 0.03
RPAIN-216ENST00000575599 CPT1AP50416 773 aa15.23■□□□□ 0.03
RPAIN-216ENST00000575599 AKAP17AQ02040 695 aaKnown RBP15.23■□□□□ 0.03
RPAIN-216ENST00000575599 PPP1R18Q6NYC8 613 aa15.23■□□□□ 0.03
RPAIN-216ENST00000575599 VSIG10LQ86VR7 867 aa15.23■□□□□ 0.03
RPAIN-216ENST00000575599 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
RPAIN-216ENST00000575599 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
RPAIN-216ENST00000575599 SCUBE2Q9NQ36 999 aa15.23■□□□□ 0.03
RPAIN-216ENST00000575599 DNAH12Q6ZR08 3092 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 A0A0U1RQG5 324 aaPredicted RBP15.22■□□□□ 0.03
RPAIN-216ENST00000575599 SPDYE3A6NKU9 549 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 hCG_1984214I3L0E3 225 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 RGS20O76081 388 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 MYL3P08590 195 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 SCG2P13521 617 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 ADCY7P51828 1080 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 PFKFB3Q16875 520 aaPredicted RBP15.22■□□□□ 0.03
RPAIN-216ENST00000575599 BRDTQ58F21 947 aaPredicted RBP15.22■□□□□ 0.03
RPAIN-216ENST00000575599 C1orf53Q5VUE5 145 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 CCDC62Q6P9F0 684 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 ZNF713Q8N859 430 aaPredicted RBP15.22■□□□□ 0.03
RPAIN-216ENST00000575599 BARHL2Q9NY43 387 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 PRKAG2Q9UGJ0 569 aa15.22■□□□□ 0.03
RPAIN-216ENST00000575599 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
RPAIN-216ENST00000575599 ELP1O95163 1332 aa15.21■□□□□ 0.03
RPAIN-216ENST00000575599 SMCO2A6NFE2 343 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 CPLX1O14810 134 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 PRPF3O43395 683 aaKnown RBP15.21■□□□□ 0.02
RPAIN-216ENST00000575599 SORBS3O60504 671 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 GH1P01241 217 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 PSMC6P62333 389 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 MRPS9P82933 396 aaKnown RBP15.21■□□□□ 0.02
RPAIN-216ENST00000575599 TLE2Q04725 743 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 NTRK3Q16288 839 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 ASTLQ6HA08 431 aaPredicted RBP15.21■□□□□ 0.02
RPAIN-216ENST00000575599 ZNF274Q96GC6 653 aaPredicted RBP15.21■□□□□ 0.02
RPAIN-216ENST00000575599 RIC8AQ9NPQ8 531 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 RTEL1Q9NZ71 1219 aa15.21■□□□□ 0.02
RPAIN-216ENST00000575599 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.02
RPAIN-216ENST00000575599 DDX41Q9UJV9 622 aaKnown RBP15.21■□□□□ 0.02
RPAIN-216ENST00000575599 CEP290O15078 2479 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 CABYRO75952 493 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 IFNAR1P17181 557 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 AK2P54819 239 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 ARHGAP1Q07960 439 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 PKN1Q16512 942 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 GNPTABQ3T906 1256 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 PCNX4Q63HM2 1172 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 AFG1LQ8WV93 481 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 PGBD1Q96JS3 809 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 RNF26Q9BY78 433 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 281.9 ms