RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 FAM178BQ8IXR5 827 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 TTC14Q96N46 770 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 TGS1Q96RS0 853 aaKnown RBP11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 TANC1Q9C0D5 1861 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 MAF1Q9H063 256 aa11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 UBE2ZQ9H832 354 aaPredicted RBP11.73□□□□□ -0.53
CALCOCO2-227ENST00000575560 MUC6Q6W4X9 2439 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 CHMP4BP1P59074 171 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 LY6KQ17RY6 165 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 TRAF7Q6Q0C0 670 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 GJD3Q8N144 294 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 TBC1D5Q92609 795 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 GTF2IRD1Q9UHL9 959 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 PTPRSQ13332 1948 aa11.72□□□□□ -0.53
CALCOCO2-227ENST00000575560 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 PRR33A8MZF0 331 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 EFCAB14O75071 495 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 GH1P01241 217 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 CASTP20810 708 aaKnown RBP11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 IKBKEQ14164 716 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 MBTPS1Q14703 1052 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 TRIM71Q2Q1W2 868 aaKnown RBP11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 RRP12Q5JTH9 1297 aaKnown RBP11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 SEPT14Q6ZU15 432 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 EMID1Q96A84 441 aaPredicted RBP11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 TAAR1Q96RJ0 339 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 IWS1Q96ST2 819 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 HDAC6Q9UBN7 1215 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 MTUS1Q9ULD2 1270 aa11.71□□□□□ -0.53
CALCOCO2-227ENST00000575560 GRXCR2A6NFK2 248 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 HAS3O00219 553 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 MX1P20591 662 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 PTK7Q13308 1070 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 DGKDQ16760 1214 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 USH1GQ495M9 461 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 GPATCH4Q5T3I0 446 aaKnown RBP11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 CHST3Q7LGC8 479 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 C7orf31Q8N865 590 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 SYTL5Q8TDW5 730 aaPredicted RBP11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 NSUN6Q8TEA1 469 aaKnown RBP11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 WNT8BQ93098 351 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 TOMM22Q9NS69 142 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 COL20A1Q9P218 1284 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 DDX41Q9UJV9 622 aaKnown RBP11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 INSL6Q9Y581 213 aa11.7□□□□□ -0.54
CALCOCO2-227ENST00000575560 COL4A4P53420 1690 aaPredicted RBP11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 RBAK-RBAKDNI3L0D1 243 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 EIF3JO75822 258 aaKnown RBP11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 F2P00734 622 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 PCP11498 1178 aaKnown RBP11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 KCNA5P22460 613 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 PSEN2P49810 448 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 STXBP2Q15833 593 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 ZNF618Q5T7W0 954 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 ALYREFQ86V81 257 aaKnown RBP11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 NEK9Q8TD19 979 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 EVI5LQ96CN4 794 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 RMDN3Q96TC7 470 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 C17orf80Q9BSJ5 609 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 UBA5Q9GZZ9 404 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 CPVLQ9H3G5 476 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 C5orf42Q9H799 3197 aa11.69□□□□□ -0.54
CALCOCO2-227ENST00000575560 ZMYM6O95789 1325 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 LGR5O75473 907 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 GOLGA8HP0CJ92 632 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 HSPD1P10809 573 aaKnown RBP11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 HOXD8P13378 290 aaPredicted RBP11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 ALADP13716 330 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 IL9P15248 144 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 LAMC2Q13753 1193 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 HIC1Q14526 733 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 MFSD10Q14728 455 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 PUS10Q3MIT2 529 aaKnown RBP11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 MCMDC2Q4G0Z9 681 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 PTCRAQ6ISU1 281 aaPredicted RBP11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 FAM117BQ6P1L5 589 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 TICAM2Q86XR7 235 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 FBXO22Q8NEZ5 403 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 PPTC7Q8NI37 304 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 MRPL38Q96DV4 380 aaKnown RBP11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 FAM227BQ96M60 508 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 ALG1Q9BT22 464 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 KATNAL1Q9BW62 490 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 CTNNA3Q9UI47 895 aa11.68□□□□□ -0.54
CALCOCO2-227ENST00000575560 ABCB11O95342 1321 aa11.67□□□□□ -0.54
CALCOCO2-227ENST00000575560 PPFIA4O75335 1185 aa11.67□□□□□ -0.54
CALCOCO2-227ENST00000575560 HAND2P61296 217 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms