RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-210ENST00000575507 RRP36Q96EU6 259 aaKnown RBP16.39■□□□□ 0.21
EDC4-210ENST00000575507 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
EDC4-210ENST00000575507 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
EDC4-210ENST00000575507 SLC12A7Q9Y666 1083 aa16.39■□□□□ 0.21
EDC4-210ENST00000575507 MROH7Q68CQ1 1323 aa16.39■□□□□ 0.21
EDC4-210ENST00000575507 RBAK-RBAKDNI3L0D1 243 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 MEIS2O14770 477 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 CSF2RAP15509 400 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 HSPA4P34932 840 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
EDC4-210ENST00000575507 FPGSQ05932 587 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 FUT2Q10981 343 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 NBPF20Q3BBV1 942 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 TMTC3Q6ZXV5 915 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 MICU3Q86XE3 530 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 VWCEQ96DN2 955 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
EDC4-210ENST00000575507 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
EDC4-210ENST00000575507 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
EDC4-210ENST00000575507 FAM217BQ9NTX9 383 aaPredicted RBP16.38■□□□□ 0.21
EDC4-210ENST00000575507 TRMT13Q9NUP7 481 aaKnown RBP16.38■□□□□ 0.21
EDC4-210ENST00000575507 TLR3O15455 904 aaKnown RBP16.37■□□□□ 0.21
EDC4-210ENST00000575507 SORBS3O60504 671 aa16.37■□□□□ 0.21
EDC4-210ENST00000575507 GH1P01241 217 aa16.37■□□□□ 0.21
EDC4-210ENST00000575507 CALM1P0DP23 149 aa16.37■□□□□ 0.21
EDC4-210ENST00000575507 CALM2P0DP24 149 aa16.37■□□□□ 0.21
EDC4-210ENST00000575507 CALM3P0DP25 149 aa16.37■□□□□ 0.21
EDC4-210ENST00000575507 GNAQP50148 359 aa16.37■□□□□ 0.21
EDC4-210ENST00000575507 TRAF1Q13077 416 aa16.37■□□□□ 0.21
EDC4-210ENST00000575507 KAT2BQ92831 832 aa16.37■□□□□ 0.21
EDC4-210ENST00000575507 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.37■□□□□ 0.215e-7■■■■□ 23.9
EDC4-210ENST00000575507 MMP3P08254 477 aa16.36■□□□□ 0.21
EDC4-210ENST00000575507 ACRP10323 421 aa16.36■□□□□ 0.21
EDC4-210ENST00000575507 CYP2C9P11712 490 aa16.36■□□□□ 0.21
EDC4-210ENST00000575507 CDC27P30260 824 aa16.36■□□□□ 0.21
EDC4-210ENST00000575507 GPR153Q6NV75 609 aa16.36■□□□□ 0.21
EDC4-210ENST00000575507 DEFB123Q8N688 67 aa16.36■□□□□ 0.21
EDC4-210ENST00000575507 NOC4LQ9BVI4 516 aaKnown RBP16.36■□□□□ 0.21
EDC4-210ENST00000575507 RTEL1Q9NZ71 1219 aa16.36■□□□□ 0.21
EDC4-210ENST00000575507 MRVI1Q9Y6F6 885 aa16.36■□□□□ 0.21
EDC4-210ENST00000575507 CCL23P55773 120 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 SEMA3FQ13275 785 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 TMEM240Q5SV17 173 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 CTAGE1Q96RT6 745 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 WNT8AQ9H1J5 351 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 HIPK3Q9H422 1215 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 TELO2Q9Y4R8 837 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 FRMPD4Q14CM0 1322 aa16.35■□□□□ 0.21
EDC4-210ENST00000575507 SZT2Q5T011 3432 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 KLF18A0A0U1RQI7 1052 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 PIK3CDO00329 1044 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 KPNA6O60684 536 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 CCND2P30279 289 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 CHMP4BP1P59074 171 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 KRT32Q14532 448 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 HSDL1Q3SXM5 330 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 CELF3Q5SZQ8 465 aaKnown RBP16.34■□□□□ 0.21
EDC4-210ENST00000575507 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
EDC4-210ENST00000575507 TYW1BQ6NUM6 668 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 ZNF365Q70YC5 407 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 DHX37Q8IY37 1157 aaKnown RBP16.34■□□□□ 0.21
EDC4-210ENST00000575507 EMID1Q96A84 441 aaPredicted RBP16.34■□□□□ 0.21
EDC4-210ENST00000575507 JAKMIP1Q96N16 626 aaKnown RBP16.34■□□□□ 0.21
EDC4-210ENST00000575507 SEZ6LQ9BYH1 1024 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 MTMR10Q9NXD2 777 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 SEC63Q9UGP8 760 aaKnown RBP16.34■□□□□ 0.21
EDC4-210ENST00000575507 CNTNAP5Q8WYK1 1306 aa16.34■□□□□ 0.21
EDC4-210ENST00000575507 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.2
EDC4-210ENST00000575507 ZBTB43O43298 467 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 GGPS1O95749 300 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 UBA1P22314 1058 aaKnown RBP16.33■□□□□ 0.2
EDC4-210ENST00000575507 ADD1P35611 737 aaKnown RBP16.33■□□□□ 0.2
EDC4-210ENST00000575507 APOBRQ0VD83 1088 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 LAMC2Q13753 1193 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 UBE2SQ16763 222 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.2
EDC4-210ENST00000575507 FAM47CQ5HY64 1035 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 SYNE3Q6ZMZ3 975 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 Q6ZUG5 572 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 TMEM199Q8N511 208 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 SMARCC2Q8TAQ2 1214 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 SCLYQ96I15 445 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 RNPC3Q96LT9 517 aaKnown RBP16.33■□□□□ 0.2
EDC4-210ENST00000575507 INPP4AQ96PE3 977 aaPredicted RBP16.33■□□□□ 0.2
EDC4-210ENST00000575507 PSTPIP2Q9H939 334 aa16.33■□□□□ 0.2
EDC4-210ENST00000575507 V9GY48 417 aaPredicted RBP16.33■□□□□ 0.2
EDC4-210ENST00000575507 SPATA31C2B4DYI2 1134 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 CASTP20810 708 aaKnown RBP16.32■□□□□ 0.2
EDC4-210ENST00000575507 PPIGQ13427 754 aaKnown RBP eCLIP16.32■□□□□ 0.22e-8■■■■□ 20.7
EDC4-210ENST00000575507 HIC1Q14526 733 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 RTN1Q16799 776 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 RASIP1Q5U651 963 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 NFRKBQ6P4R8 1299 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 PPTC7Q8NI37 304 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 FAM161BQ96MY7 647 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 USP26Q9BXU7 913 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 LAMA3Q16787 3333 aa16.32■□□□□ 0.2
EDC4-210ENST00000575507 GOLGA8AA7E2F4 631 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms