RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 GPATCH4Q5T3I0 446 aaKnown RBP10.56□□□□□ -0.72
SMG6-218ENST00000575454 SPRED2Q7Z698 418 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.56□□□□□ -0.72
SMG6-218ENST00000575454 KAT2BQ92831 832 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
SMG6-218ENST00000575454 CTAGE1Q96RT6 745 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 UPF3BQ9BZI7 483 aaKnown RBP10.56□□□□□ -0.72
SMG6-218ENST00000575454 PRKAG3Q9UGI9 489 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 WDR87Q6ZQQ6 2873 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 DCXO43602 365 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 LGR5O75473 907 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 EIF3JO75822 258 aaKnown RBP10.55□□□□□ -0.72
SMG6-218ENST00000575454 ARIH2O95376 493 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 SNHG28P0DPA3 235 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 ARHGAP1Q07960 439 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 LY6KQ17RY6 165 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 SEPT14Q6ZU15 432 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 RASGRP2Q7LDG7 609 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 TMCO2Q7Z6W1 182 aaPredicted RBP10.55□□□□□ -0.72
SMG6-218ENST00000575454 TICAM2Q86XR7 235 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 PPTC7Q8NI37 304 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 NEK9Q8TD19 979 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 PPP1R13LQ8WUF5 828 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 DHX38Q92620 1227 aaKnown RBP10.55□□□□□ -0.72
SMG6-218ENST00000575454 INCENPQ9NQS7 918 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 HDAC6Q9UBN7 1215 aa10.55□□□□□ -0.72
SMG6-218ENST00000575454 PRRC2BQ5JSZ5 2229 aaKnown RBP10.54□□□□□ -0.72
SMG6-218ENST00000575454 PPFIA4O75335 1185 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 PSEN2P49810 448 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 MFSD10Q14728 455 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 KIAA0753Q2KHM9 967 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 RRP12Q5JTH9 1297 aaKnown RBP10.54□□□□□ -0.72
SMG6-218ENST00000575454 CHST3Q7LGC8 479 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 PI4K2BQ8TCG2 481 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 MFSD14AQ96MC6 490 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 RMDN3Q96TC7 470 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 HELLSQ9NRZ9 838 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 DDX41Q9UJV9 622 aaKnown RBP10.54□□□□□ -0.72
SMG6-218ENST00000575454 RCAN3Q9UKA8 241 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 ABCB11O95342 1321 aa10.54□□□□□ -0.72
SMG6-218ENST00000575454 PLXNA1Q9UIW2 1896 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 USP34Q70CQ2 3546 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 POTEB3A0JP26 581 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 RSPH10B2B2RC85 870 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 FOXP2O15409 715 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 F2P00734 622 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 RSPH10BP0C881 870 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 IL9P15248 144 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 MX1P20591 662 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 MRE11P49959 708 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 HTRA4P83105 476 aaPredicted RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 TRIM71Q2Q1W2 868 aaKnown RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 USH1GQ495M9 461 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 EPC2Q52LR7 807 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 CCDC178Q5BJE1 867 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 ZNF618Q5T7W0 954 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 ARHGEF16Q5VV41 709 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 FAM117BQ6P1L5 589 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 KCNV1Q6PIU1 500 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 DHX37Q8IY37 1157 aaKnown RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 MYOCDQ8IZQ8 938 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 SP7Q8TDD2 431 aaPredicted RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 SYTL5Q8TDW5 730 aaPredicted RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 PABPC5Q96DU9 382 aaKnown RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 YME1L1Q96TA2 773 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 C17orf80Q9BSJ5 609 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 RNF41Q9H4P4 317 aaPredicted RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 MRPL11Q9Y3B7 192 aaKnown RBP10.53□□□□□ -0.72
SMG6-218ENST00000575454 MRVI1Q9Y6F6 885 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 SPTBN4Q9H254 2564 aa10.53□□□□□ -0.72
SMG6-218ENST00000575454 GREB1LQ9C091 1923 aaPredicted RBP10.52□□□□□ -0.72
SMG6-218ENST00000575454 PARP14Q460N5 1801 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 H3BNC9 293 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 HAS3O00219 553 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 CAND2O75155 1236 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 FGAP02671 866 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 HSPD1P10809 573 aaKnown RBP10.52□□□□□ -0.73
SMG6-218ENST00000575454 THPOP40225 353 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 NHLH1Q02575 133 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 GPM6BQ13491 265 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 COL19A1Q14993 1142 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 TRAF7Q6Q0C0 670 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 DGKHQ86XP1 1220 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 ADHFE1Q8IWW8 467 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 MIER1Q8N108 512 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 DBF4BQ8NFT6 615 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 SEPT8Q92599 483 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 ESR2Q92731 530 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 EVI5LQ96CN4 794 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 TAAR1Q96RJ0 339 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 POP1Q99575 1024 aaKnown RBP10.52□□□□□ -0.73
SMG6-218ENST00000575454 ALG1Q9BT22 464 aa10.52□□□□□ -0.73
SMG6-218ENST00000575454 NSUN3Q9H649 340 aaKnown RBP10.52□□□□□ -0.73
SMG6-218ENST00000575454 COL11A1P12107 1806 aaPredicted RBP10.51□□□□□ -0.73
SMG6-218ENST00000575454 ZNFX1Q9P2E3 1918 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms