RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 PCDHA6Q9UN73 950 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 Q9Y3F1 56 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 PCDHA8Q9Y5H6 950 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 DYNC1LI2O43237 492 aaPredicted RBP17.42■□□□□ 0.38
LITAF-217ENST00000575426 C6orf222P0C671 652 aaPredicted RBP17.42■□□□□ 0.38
LITAF-217ENST00000575426 SMPD1P17405 629 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 GNPTABQ3T906 1256 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 DUSP28Q4G0W2 176 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 XRRA1Q6P2D8 792 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 KCNV1Q6PIU1 500 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 TLK2Q86UE8 772 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 ORC3Q9UBD5 711 aaPredicted RBP17.42■□□□□ 0.38
LITAF-217ENST00000575426 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 SYNRGQ9UMZ2 1314 aa17.42■□□□□ 0.38
LITAF-217ENST00000575426 ZEB2O60315 1214 aa17.41■□□□□ 0.38
LITAF-217ENST00000575426 MCM2P49736 904 aa17.41■□□□□ 0.38
LITAF-217ENST00000575426 GJA9P57773 515 aa17.41■□□□□ 0.38
LITAF-217ENST00000575426 AP3B2Q13367 1082 aa17.41■□□□□ 0.38
LITAF-217ENST00000575426 BRDTQ58F21 947 aaPredicted RBP17.41■□□□□ 0.38
LITAF-217ENST00000575426 GNASQ5JWF2 1037 aa17.41■□□□□ 0.38
LITAF-217ENST00000575426 PCNX4Q63HM2 1172 aa17.41■□□□□ 0.38
LITAF-217ENST00000575426 FAM177A1Q8N128 213 aaPredicted RBP17.41■□□□□ 0.38
LITAF-217ENST00000575426 PCSK9Q8NBP7 692 aaKnown RBP17.41■□□□□ 0.38
LITAF-217ENST00000575426 DIS3LQ8TF46 1054 aaKnown RBP17.41■□□□□ 0.38
LITAF-217ENST00000575426 TSEN34Q9BSV6 310 aaKnown RBP17.41■□□□□ 0.38
LITAF-217ENST00000575426 GNEQ9Y223 722 aaKnown RBP17.41■□□□□ 0.38
LITAF-217ENST00000575426 MRVI1Q9Y6F6 885 aa17.41■□□□□ 0.38
LITAF-217ENST00000575426 FRMPD4Q14CM0 1322 aa17.41■□□□□ 0.38
LITAF-217ENST00000575426 ADCY6O43306 1168 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 ADAMTS4O75173 837 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 JAKMIP3Q5VZ66 844 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 UBE2Q1Q7Z7E8 422 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 CCDC83Q8IWF9 413 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
LITAF-217ENST00000575426 OR6J1Q8NGC5 347 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 IL31RAQ8NI17 732 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 ANO3Q9BYT9 981 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 SENP6Q9GZR1 1112 aaPredicted RBP17.4■□□□□ 0.38
LITAF-217ENST00000575426 UPF3AQ9H1J1 476 aaKnown RBP17.4■□□□□ 0.38
LITAF-217ENST00000575426 RTEL1Q9NZ71 1219 aa17.4■□□□□ 0.38
LITAF-217ENST00000575426 CTDNEP1O95476 244 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
LITAF-217ENST00000575426 MNX1P50219 401 aaPredicted RBP17.39■□□□□ 0.37
LITAF-217ENST00000575426 KCNA10Q16322 511 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 GALNT17Q6IS24 598 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 NLRX1Q86UT6 975 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 NSUN7Q8NE18 718 aaKnown RBP17.39■□□□□ 0.37
LITAF-217ENST00000575426 KLHDC9Q8NEP7 349 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 DPF3Q92784 378 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 ZFP91Q96JP5 570 aaPredicted RBP17.39■□□□□ 0.37
LITAF-217ENST00000575426 TMEM260Q9NX78 707 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 DOCK5Q9H7D0 1870 aa17.39■□□□□ 0.37
LITAF-217ENST00000575426 MOXD2PA6NHM9 499 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 GH1P01241 217 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 TGFB3P10600 412 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 CST5P28325 142 aaPredicted RBP17.38■□□□□ 0.37
LITAF-217ENST00000575426 CPT1AP50416 773 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 MRPS9P82933 396 aaKnown RBP17.38■□□□□ 0.37
LITAF-217ENST00000575426 FSCN1Q16658 493 aaKnown RBP17.38■□□□□ 0.37
LITAF-217ENST00000575426 CCDC62Q6P9F0 684 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 VTI1AQ96AJ9 217 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 PGBD1Q96JS3 809 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 AIFM3Q96NN9 605 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 LLPHQ9BRT6 129 aaKnown RBP17.38■□□□□ 0.37
LITAF-217ENST00000575426 ALG1Q9BT22 464 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
LITAF-217ENST00000575426 ARIH2O95376 493 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 COL6A1P12109 1028 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 ZNF76P36508 570 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 NKX3-2P78367 333 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 BEX3Q00994 111 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 TRIM29Q14134 588 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 TMEM63BQ5T3F8 832 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 DHX37Q8IY37 1157 aaKnown RBP17.37■□□□□ 0.37
LITAF-217ENST00000575426 COPS5Q92905 334 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 FERMT2Q96AC1 680 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 CDHR1Q96JP9 859 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 DDX41Q9UJV9 622 aaKnown RBP17.37■□□□□ 0.37
LITAF-217ENST00000575426 PHF24Q9UPV7 400 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 ALPK3Q96L96 1907 aa17.37■□□□□ 0.37
LITAF-217ENST00000575426 BRCA2P51587 3418 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 MYADML2A6NDP7 307 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 FIBPO43427 364 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 DTNBO60941 627 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 RGS20O76081 388 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 ASGR1P07306 291 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 ACLYP53396 1101 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 LAMC2Q13753 1193 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 BLIDQ8IZY5 108 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 GLT1D1Q96MS3 346 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 INPP4AQ96PE3 977 aaPredicted RBP17.36■□□□□ 0.37
LITAF-217ENST00000575426 MLXIPQ9HAP2 919 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 POLR3EQ9NVU0 708 aa17.36■□□□□ 0.37
LITAF-217ENST00000575426 MAFGO15525 162 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 JAK2O60674 1132 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 FDPSP14324 419 aaKnown RBP17.35■□□□□ 0.37
LITAF-217ENST00000575426 ICAM3P32942 547 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 SREBF1P36956 1147 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms