RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 EIF2AK2P19525 551 aaKnown RBP12.22□□□□□ -0.45
LITAF-216ENST00000574848 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
LITAF-216ENST00000574848 BRDTQ58F21 947 aaPredicted RBP12.22□□□□□ -0.45
LITAF-216ENST00000574848 ARHGEF16Q5VV41 709 aa12.22□□□□□ -0.45
LITAF-216ENST00000574848 COPS5Q92905 334 aa12.22□□□□□ -0.45
LITAF-216ENST00000574848 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
LITAF-216ENST00000574848 MTG1Q9BT17 334 aaPredicted RBP12.22□□□□□ -0.45
LITAF-216ENST00000574848 GCOM1H8Y6P7 765 aaPredicted RBP12.21□□□□□ -0.45
LITAF-216ENST00000574848 B4GALT4O60513 344 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 RGS20O76081 388 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 GH1P01241 217 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 POLR2MP0CAP2 368 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 GNAQP50148 359 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 PSMC6P62333 389 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 SMAD3P84022 425 aaKnown RBP12.21□□□□□ -0.45
LITAF-216ENST00000574848 PTPN11Q06124 597 aaPredicted RBP12.21□□□□□ -0.45
LITAF-216ENST00000574848 PPIGQ13427 754 aaKnown RBP eCLIP12.21□□□□□ -0.45
LITAF-216ENST00000574848 NBR1Q14596 966 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 PGM5Q15124 567 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 RASIP1Q5U651 963 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 MYL10Q9BUA6 226 aa12.21□□□□□ -0.45
LITAF-216ENST00000574848 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.45
LITAF-216ENST00000574848 ALDH8A1Q9H2A2 487 aaPredicted RBP12.21□□□□□ -0.45
LITAF-216ENST00000574848 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 PIK3CDO00329 1044 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 MMP3P08254 477 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 HOXD8P13378 290 aaPredicted RBP12.2□□□□□ -0.46
LITAF-216ENST00000574848 HOXA13P31271 388 aaPredicted RBP12.2□□□□□ -0.46
LITAF-216ENST00000574848 NEK4P51957 841 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 NFRKBQ6P4R8 1299 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 VSIG10LQ86VR7 867 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 SESTD1Q86VW0 696 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 TMEM199Q8N511 208 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 IL31RAQ8NI17 732 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 KCNB2Q92953 911 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 RRP36Q96EU6 259 aaKnown RBP12.2□□□□□ -0.46
LITAF-216ENST00000574848 RNPC3Q96LT9 517 aaKnown RBP12.2□□□□□ -0.46
LITAF-216ENST00000574848 HIPK3Q9H422 1215 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 MTMR10Q9NXD2 777 aa12.2□□□□□ -0.46
LITAF-216ENST00000574848 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
LITAF-216ENST00000574848 TMEM265A0A087WTH1 108 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 STAM2O75886 525 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 PLEKHA8P1O95397 391 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 MYL3P08590 195 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 SUPT20HL2P0C7V6 817 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 CSF2RAP15509 400 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 PSMA5P28066 241 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
LITAF-216ENST00000574848 KRT32Q14532 448 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 LY6KQ17RY6 165 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 TMEM240Q5SV17 173 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 PSRC1Q6PGN9 363 aaPredicted RBP12.19□□□□□ -0.46
LITAF-216ENST00000574848 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 NFXL1Q6ZNB6 911 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 SEPT14Q6ZU15 432 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 Q7L0L9 218 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 C16orf59Q7L2K0 433 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 RASEFQ8IZ41 740 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 SRBD1Q8N5C6 995 aaKnown RBP12.19□□□□□ -0.46
LITAF-216ENST00000574848 PPTC7Q8NI37 304 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 AFG1LQ8WV93 481 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 NEK1Q96PY6 1258 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.19□□□□□ -0.46
LITAF-216ENST00000574848 PPP1R12CQ9BZL4 782 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 TRPV6Q9H1D0 765 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 WNT8AQ9H1J5 351 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 SLC12A7Q9Y666 1083 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 MRVI1Q9Y6F6 885 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 COL6A3P12111 3177 aa12.19□□□□□ -0.46
LITAF-216ENST00000574848 UMODL1Q5DID0 1318 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 F2P00734 622 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 TGFB3P10600 412 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 PTMSP20962 102 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 CCND2P30279 289 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 CYP2C18P33260 490 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 RCAN1P53805 252 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 NBPF20Q3BBV1 942 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 DHX32Q7L7V1 743 aaKnown RBP12.18□□□□□ -0.46
LITAF-216ENST00000574848 TEX2Q8IWB9 1127 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 KAT2BQ92831 832 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 INPP4AQ96PE3 977 aaPredicted RBP12.18□□□□□ -0.46
LITAF-216ENST00000574848 TM6SF1Q9BZW5 370 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 IL23AQ9NPF7 189 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 SEC63Q9UGP8 760 aaKnown RBP12.18□□□□□ -0.46
LITAF-216ENST00000574848 STXBP5LQ9Y2K9 1186 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 NID2Q14112 1375 aa12.18□□□□□ -0.46
LITAF-216ENST00000574848 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 MEIS2O14770 477 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 HMGB1P09429 215 aaKnown RBP12.17□□□□□ -0.46
LITAF-216ENST00000574848 RXRAP19793 462 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 UBA1P22314 1058 aaKnown RBP12.17□□□□□ -0.46
LITAF-216ENST00000574848 ICAM3P32942 547 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 LAMC2Q13753 1193 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 DGKDQ16760 1214 aa12.17□□□□□ -0.46
LITAF-216ENST00000574848 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms