RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 TARBP2Q15633 366 aaKnown RBP7.33□□□□□ -1.24
CDC27-216ENST00000574304 MROH9Q5TGP6 573 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 RSPO2Q6UXX9 243 aaPredicted RBP7.33□□□□□ -1.24
CDC27-216ENST00000574304 RIOX2Q8IUF8 465 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 SCUBE1Q8IWY4 988 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 LRRC56Q8IYG6 542 aaPredicted RBP7.33□□□□□ -1.24
CDC27-216ENST00000574304 UBXN4Q92575 508 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 ALG3Q92685 438 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 DNAJC7Q99615 494 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 AP5M1Q9H0R1 490 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 BCAS3Q9H6U6 928 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 CLDND1Q9NY35 253 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 COA3Q9Y2R0 106 aaPredicted RBP7.33□□□□□ -1.24
CDC27-216ENST00000574304 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 H7BY64 318 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 RFXAPO00287 272 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 BUB1BO60566 1050 aaPredicted RBP7.32□□□□□ -1.24
CDC27-216ENST00000574304 MSCO60682 206 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 PFKLP17858 780 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 PI3P19957 117 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 FOXB2Q5VYV0 432 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 CIAPIN1Q6FI81 312 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 KCNT2Q6UVM3 1135 aa7.32□□□□□ -1.24
CDC27-216ENST00000574304 ZSCAN18Q8TBC5 510 aaPredicted RBP7.32□□□□□ -1.24
CDC27-216ENST00000574304 IPO9Q96P70 1041 aaKnown RBP7.32□□□□□ -1.24
CDC27-216ENST00000574304 NUAK1O60285 661 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 ASGR2P07307 311 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 SLC6A11P48066 632 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 SUMO1P63165 101 aaKnown RBP7.31□□□□□ -1.24
CDC27-216ENST00000574304 LONRF2Q1L5Z9 754 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 ZNF385BQ569K4 471 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 FAM209AQ5JX71 171 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 C1QL4Q86Z23 238 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 SEC14L1Q92503 715 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 ZFYVE21Q9BQ24 234 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 RNF38Q9H0F5 515 aa7.31□□□□□ -1.24
CDC27-216ENST00000574304 SGSM2O43147 1006 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 NCAM1P13591 858 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 IGFBP6P24592 240 aaPredicted RBP7.3□□□□□ -1.24
CDC27-216ENST00000574304 PMLP29590 882 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 NFE2L2Q16236 605 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 STYK1Q6J9G0 422 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 DPH6Q7L8W6 267 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 TMEFF1Q8IYR6 380 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 PANK1Q8TE04 598 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 EXOC2Q96KP1 924 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 IRF2BPLQ9H1B7 796 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
CDC27-216ENST00000574304 ATF2P15336 505 aa7.29□□□□□ -1.24
CDC27-216ENST00000574304 BMS1Q14692 1282 aaKnown RBP7.29□□□□□ -1.24
CDC27-216ENST00000574304 LBX2Q6XYB7 198 aa7.29□□□□□ -1.24
CDC27-216ENST00000574304 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDC27-216ENST00000574304 DHRS4Q9BTZ2 278 aa7.29□□□□□ -1.24
CDC27-216ENST00000574304 EPB41L1Q9H4G0 881 aa7.29□□□□□ -1.24
CDC27-216ENST00000574304 EPB41L4AQ9HCS5 686 aaPredicted RBP7.29□□□□□ -1.24
CDC27-216ENST00000574304 PPARGC1AQ9UBK2 798 aaKnown RBP7.29□□□□□ -1.24
CDC27-216ENST00000574304 PALD1Q9ULE6 856 aa7.29□□□□□ -1.24
CDC27-216ENST00000574304 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
CDC27-216ENST00000574304 DGKIO75912 1065 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 MC3RP41968 323 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 GPR85P60893 370 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 FZD5Q13467 585 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 KIZQ2M2Z5 673 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 ZC3H12BQ5HYM0 836 aaKnown RBP7.28□□□□□ -1.24
CDC27-216ENST00000574304 CNKSR3Q6P9H4 555 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 AMIGO3Q86WK7 504 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 FAM129CQ86XR2 697 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 IFNL3Q8IZI9 196 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 LNPKQ9C0E8 428 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 ZSWIM4Q9H7M6 989 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 FAN1Q9Y2M0 1017 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 MRPS23Q9Y3D9 190 aaKnown RBP7.28□□□□□ -1.24
CDC27-216ENST00000574304 TRAF6Q9Y4K3 522 aa7.28□□□□□ -1.24
CDC27-216ENST00000574304 ASXL2Q76L83 1435 aa7.27□□□□□ -1.24
CDC27-216ENST00000574304 LIMS1P48059 325 aa7.27□□□□□ -1.25
CDC27-216ENST00000574304 CHRNA2Q15822 529 aa7.27□□□□□ -1.25
CDC27-216ENST00000574304 STEAP3Q658P3 488 aa7.27□□□□□ -1.25
CDC27-216ENST00000574304 MAMDC2Q7Z304 686 aaPredicted RBP7.27□□□□□ -1.25
CDC27-216ENST00000574304 MILR1Q7Z6M3 343 aa7.27□□□□□ -1.25
CDC27-216ENST00000574304 THAP3Q8WTV1 239 aaPredicted RBP7.27□□□□□ -1.25
CDC27-216ENST00000574304 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDC27-216ENST00000574304 CPA5Q8WXQ8 436 aa7.27□□□□□ -1.25
CDC27-216ENST00000574304 PTPRN2Q92932 1015 aa7.27□□□□□ -1.25
CDC27-216ENST00000574304 JAM3Q9BX67 310 aa7.27□□□□□ -1.25
CDC27-216ENST00000574304 HGSO14964 777 aaPredicted RBP7.26□□□□□ -1.25
CDC27-216ENST00000574304 C6orf222P0C671 652 aaPredicted RBP7.26□□□□□ -1.25
CDC27-216ENST00000574304 GRK2P25098 689 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 GRK3P35626 688 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 FOXO4P98177 505 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 CCDC144BQ3MJ40 725 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 B3GNT8Q7Z7M8 397 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 KRTAP1-3Q8IUG1 177 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 TMEM151BQ8IW70 566 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 LILRB2Q8N423 598 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 JMYQ8N9B5 988 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 KISS1RQ969F8 398 aaPredicted RBP7.26□□□□□ -1.25
CDC27-216ENST00000574304 DACT3Q96B18 629 aaPredicted RBP7.26□□□□□ -1.25
CDC27-216ENST00000574304 MRFAP1L1Q96HT8 127 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 PWWP2AQ96N64 755 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms