RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 LAMC2Q13753 1193 aa19.05■□□□□ 0.64
TVP23B-207ENST00000574294 HIPK3Q9H422 1215 aa19.05■□□□□ 0.64
TVP23B-207ENST00000574294 RBM28Q9NW13 759 aaKnown RBP19.05■□□□□ 0.64
TVP23B-207ENST00000574294 DDX41Q9UJV9 622 aaKnown RBP19.05■□□□□ 0.64
TVP23B-207ENST00000574294 PIK3CDO00329 1044 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 REC8O95072 547 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 ARIH2O95376 493 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 CASTP20810 708 aaKnown RBP19.04■□□□□ 0.64
TVP23B-207ENST00000574294 PTGS1P23219 599 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 HOXA13P31271 388 aaPredicted RBP19.04■□□□□ 0.64
TVP23B-207ENST00000574294 RCAN1P53805 252 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 PGM5Q15124 567 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 DGKDQ16760 1214 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 C9orf50Q5SZB4 431 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 ERICH6BQ5W0A0 696 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 XRRA1Q6P2D8 792 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 PSRC1Q6PGN9 363 aaPredicted RBP19.04■□□□□ 0.64
TVP23B-207ENST00000574294 SKAP1Q86WV1 359 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 DEFB123Q8N688 67 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 RNPC3Q96LT9 517 aaKnown RBP19.04■□□□□ 0.64
TVP23B-207ENST00000574294 MYL10Q9BUA6 226 aa19.04■□□□□ 0.64
TVP23B-207ENST00000574294 EPB41L2O43491 1005 aaKnown RBP19.03■□□□□ 0.64
TVP23B-207ENST00000574294 B4GALT4O60513 344 aa19.03■□□□□ 0.64
TVP23B-207ENST00000574294 MYCLP12524 364 aaPredicted RBP19.03■□□□□ 0.64
TVP23B-207ENST00000574294 PSMC6P62333 389 aa19.03■□□□□ 0.64
TVP23B-207ENST00000574294 EXOSC10Q01780 885 aaKnown RBP19.03■□□□□ 0.64
TVP23B-207ENST00000574294 ARHGAP1Q07960 439 aa19.03■□□□□ 0.64
TVP23B-207ENST00000574294 LY6KQ17RY6 165 aa19.03■□□□□ 0.64
TVP23B-207ENST00000574294 GNPTABQ3T906 1256 aa19.03■□□□□ 0.64
TVP23B-207ENST00000574294 FCHSD1Q86WN1 690 aa19.03■□□□□ 0.64
TVP23B-207ENST00000574294 SRBD1Q8N5C6 995 aaKnown RBP19.03■□□□□ 0.64
TVP23B-207ENST00000574294 COPS5Q92905 334 aa19.03■□□□□ 0.64
TVP23B-207ENST00000574294 MTIF3Q9H2K0 278 aaKnown RBP19.03■□□□□ 0.64
TVP23B-207ENST00000574294 FRMPD4Q14CM0 1322 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 MYH7BA7E2Y1 1941 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 MMP3P08254 477 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 NBPF20Q3BBV1 942 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 APOA5Q6Q788 366 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 DHX37Q8IY37 1157 aaKnown RBP19.02■□□□□ 0.64
TVP23B-207ENST00000574294 PPTC7Q8NI37 304 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 SMARCC2Q8TAQ2 1214 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 AFG1LQ8WV93 481 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 NOC4LQ9BVI4 516 aaKnown RBP19.02■□□□□ 0.64
TVP23B-207ENST00000574294 KATNAL1Q9BW62 490 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 TRPV6Q9H1D0 765 aa19.02■□□□□ 0.64
TVP23B-207ENST00000574294 PPFIA4O75335 1185 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 PLEKHA8P1O95397 391 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 CSF2RAP15509 400 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 EPHB4P54760 987 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 MICU3Q86XE3 530 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 RPUSD2Q8IZ73 545 aaKnown RBP19.01■□□□□ 0.63
TVP23B-207ENST00000574294 KCNB2Q92953 911 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 LRRC2Q9BYS8 371 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 PPP1R12CQ9BZL4 782 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 IL23AQ9NPF7 189 aa19.01■□□□□ 0.63
TVP23B-207ENST00000574294 TMEM265A0A087WTH1 108 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 hCG_1984214I3L0E3 225 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 ZBTB43O43298 467 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 CYP2C18P33260 490 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 FGD1P98174 961 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 FAM47CQ5HY64 1035 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 ZNF697Q5TEC3 545 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 SESTD1Q86VW0 696 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 RASEFQ8IZ41 740 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 ZNF713Q8N859 430 aaPredicted RBP19■□□□□ 0.63
TVP23B-207ENST00000574294 PIBF1Q8WXW3 757 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 PSTPIP2Q9H939 334 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 MTMR10Q9NXD2 777 aa19■□□□□ 0.63
TVP23B-207ENST00000574294 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.99■□□□□ 0.63
TVP23B-207ENST00000574294 CCDC196A0A1B0GTZ2 297 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.99■□□□□ 0.63
TVP23B-207ENST00000574294 PITPNM1O00562 1244 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 RGS20O76081 388 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 PFKMP08237 780 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 HOXD8P13378 290 aaPredicted RBP18.99■□□□□ 0.63
TVP23B-207ENST00000574294 RXRAP19793 462 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 ICAM3P32942 547 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 HSPA4P34932 840 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 CELF3Q5SZQ8 465 aaKnown RBP18.99■□□□□ 0.63
TVP23B-207ENST00000574294 MYSM1Q5VVJ2 828 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 PCNX4Q63HM2 1172 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 CCDC155Q8N6L0 562 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 INPP4AQ96PE3 977 aaPredicted RBP18.99■□□□□ 0.63
TVP23B-207ENST00000574294 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.99■□□□□ 0.63
TVP23B-207ENST00000574294 NOD1Q9Y239 953 aa18.99■□□□□ 0.63
TVP23B-207ENST00000574294 MEIS2O14770 477 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 PSMA5P28066 241 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 RFC2P35250 354 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 BFSP2Q13515 415 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 NEDD9Q14511 834 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 RTN1Q16799 776 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 ADCK5Q3MIX3 580 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 TMEM240Q5SV17 173 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 FBXL16Q8N461 479 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 IL31RAQ8NI17 732 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 CDHR1Q96JP9 859 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 GLT8D2Q9H1C3 349 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 EHMT1Q9H9B1 1298 aa18.98■□□□□ 0.63
TVP23B-207ENST00000574294 TRMT13Q9NUP7 481 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms