RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 MYH7BA7E2Y1 1941 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 SCN10AQ9Y5Y9 1956 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 CALM1P0DP23 149 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 CALM2P0DP24 149 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 CALM3P0DP25 149 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 GNAQP50148 359 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 PPIGQ13427 754 aaKnown RBP eCLIP30.12■■■□□ 2.412e-17■□□□□ 8.5
NPLOC4-215ENST00000574095 NBPF20Q3BBV1 942 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 C16orf59Q7L2K0 433 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 IL31RAQ8NI17 732 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 HIPK3Q9H422 1215 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 TRMT13Q9NUP7 481 aaKnown RBP30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 MTMR10Q9NXD2 777 aa30.12■■■□□ 2.41
NPLOC4-215ENST00000574095 ACRP10323 421 aa30.11■■■□□ 2.41
NPLOC4-215ENST00000574095 FAM47CQ5HY64 1035 aa30.11■■■□□ 2.41
NPLOC4-215ENST00000574095 VSIG10LQ86VR7 867 aa30.11■■■□□ 2.41
NPLOC4-215ENST00000574095 TCEANC2Q96MN5 208 aa30.11■■■□□ 2.41
NPLOC4-215ENST00000574095 RGS20O76081 388 aa30.1■■■□□ 2.41
NPLOC4-215ENST00000574095 MMP3P08254 477 aa30.1■■■□□ 2.41
NPLOC4-215ENST00000574095 CHMP4BP1P59074 171 aa30.1■■■□□ 2.41
NPLOC4-215ENST00000574095 ADCK5Q3MIX3 580 aa30.1■■■□□ 2.41
NPLOC4-215ENST00000574095 NOC4LQ9BVI4 516 aaKnown RBP30.1■■■□□ 2.41
NPLOC4-215ENST00000574095 SEC63Q9UGP8 760 aaKnown RBP30.1■■■□□ 2.41
NPLOC4-215ENST00000574095 CCL23P55773 120 aa30.09■■■□□ 2.41
NPLOC4-215ENST00000574095 EXOSC10Q01780 885 aaKnown RBP30.09■■■□□ 2.41
NPLOC4-215ENST00000574095 SGMS1Q86VZ5 419 aa30.09■■■□□ 2.41
NPLOC4-215ENST00000574095 CCDC82Q8N4S0 544 aa30.09■■■□□ 2.41
NPLOC4-215ENST00000574095 FANCBQ8NB91 859 aa30.09■■■□□ 2.41
NPLOC4-215ENST00000574095 CYP2C9P11712 490 aa30.08■■■□□ 2.41
NPLOC4-215ENST00000574095 CCND2P30279 289 aa30.08■■■□□ 2.41
NPLOC4-215ENST00000574095 TSGA10IPQ3SY00 556 aa30.08■■■□□ 2.41
NPLOC4-215ENST00000574095 TMEM240Q5SV17 173 aa30.08■■■□□ 2.41
NPLOC4-215ENST00000574095 FAM109BQ6ICB4 259 aaPredicted RBP30.08■■■□□ 2.41
NPLOC4-215ENST00000574095 DHX32Q7L7V1 743 aaKnown RBP30.08■■■□□ 2.41
NPLOC4-215ENST00000574095 MICU3Q86XE3 530 aa30.08■■■□□ 2.41
NPLOC4-215ENST00000574095 FAM161BQ96MY7 647 aa30.08■■■□□ 2.41
NPLOC4-215ENST00000574095 hCG_1642624A0A1W2PR95 340 aa30.07■■■□□ 2.4
NPLOC4-215ENST00000574095 SMAD3P84022 425 aaKnown RBP30.07■■■□□ 2.4
NPLOC4-215ENST00000574095 NFRKBQ6P4R8 1299 aa30.07■■■□□ 2.4
NPLOC4-215ENST00000574095 DHX37Q8IY37 1157 aaKnown RBP30.07■■■□□ 2.4
NPLOC4-215ENST00000574095 SORBS3O60504 671 aa30.06■■■□□ 2.4
NPLOC4-215ENST00000574095 SUPT20HL2P0C7V6 817 aa30.06■■■□□ 2.4
NPLOC4-215ENST00000574095 LAMC2Q13753 1193 aa30.06■■■□□ 2.4
NPLOC4-215ENST00000574095 USP17L6PQ6QN14 398 aa30.06■■■□□ 2.4
NPLOC4-215ENST00000574095 SYNE3Q6ZMZ3 975 aa30.06■■■□□ 2.4
NPLOC4-215ENST00000574095 ZNF365Q70YC5 407 aa30.06■■■□□ 2.4
NPLOC4-215ENST00000574095 WNT8AQ9H1J5 351 aa30.06■■■□□ 2.4
NPLOC4-215ENST00000574095 IL23AQ9NPF7 189 aa30.06■■■□□ 2.4
NPLOC4-215ENST00000574095 NEFLP07196 543 aa30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 CASTP20810 708 aaKnown RBP30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 ZNF697Q5TEC3 545 aa30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 KCNV1Q6PIU1 500 aa30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 TMTC3Q6ZXV5 915 aa30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 SMARCC2Q8TAQ2 1214 aa30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 KAT2BQ92831 832 aa30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 GPKOWQ92917 476 aaPredicted RBP eCLIP30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 EMID1Q96A84 441 aaPredicted RBP30.05■■■□□ 2.4
NPLOC4-215ENST00000574095 SP2Q02086 613 aa30.04■■■□□ 2.4
NPLOC4-215ENST00000574095 KRT32Q14532 448 aa30.04■■■□□ 2.4
NPLOC4-215ENST00000574095 DGKDQ16760 1214 aa30.04■■■□□ 2.4
NPLOC4-215ENST00000574095 APOA5Q6Q788 366 aa30.04■■■□□ 2.4
NPLOC4-215ENST00000574095 CUL5Q93034 780 aa30.04■■■□□ 2.4
NPLOC4-215ENST00000574095 SCLYQ96I15 445 aa30.04■■■□□ 2.4
NPLOC4-215ENST00000574095 BRPF3Q9ULD4 1205 aa30.04■■■□□ 2.4
NPLOC4-215ENST00000574095 MEIS2O14770 477 aa30.03■■■□□ 2.4
NPLOC4-215ENST00000574095 MRPS9P82933 396 aaKnown RBP30.03■■■□□ 2.4
NPLOC4-215ENST00000574095 PTPN11Q06124 597 aaPredicted RBP30.03■■■□□ 2.4
NPLOC4-215ENST00000574095 MYSM1Q5VVJ2 828 aa30.03■■■□□ 2.4
NPLOC4-215ENST00000574095 PSRC1Q6PGN9 363 aaPredicted RBP30.03■■■□□ 2.4
NPLOC4-215ENST00000574095 RTEL1Q9NZ71 1219 aa30.03■■■□□ 2.4
NPLOC4-215ENST00000574095 FRMPD4Q14CM0 1322 aa30.02■■■□□ 2.4
NPLOC4-215ENST00000574095 COL6A3P12111 3177 aa30.02■■■□□ 2.4
NPLOC4-215ENST00000574095 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.02■■■□□ 2.4
NPLOC4-215ENST00000574095 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.02■■■□□ 2.4
NPLOC4-215ENST00000574095 GGPS1O95749 300 aa30.02■■■□□ 2.4
NPLOC4-215ENST00000574095 CELF3Q5SZQ8 465 aaKnown RBP30.02■■■□□ 2.4
NPLOC4-215ENST00000574095 PPTC7Q8NI37 304 aa30.02■■■□□ 2.4
NPLOC4-215ENST00000574095 PIK3CDO00329 1044 aa30.01■■■□□ 2.39
NPLOC4-215ENST00000574095 CPA1P15085 419 aa30.01■■■□□ 2.39
NPLOC4-215ENST00000574095 UBA1P22314 1058 aaKnown RBP30.01■■■□□ 2.39
NPLOC4-215ENST00000574095 GUCD1Q96NT3 240 aa30.01■■■□□ 2.39
NPLOC4-215ENST00000574095 ZBTB43O43298 467 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 FGBP02675 491 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 TGFB3P10600 412 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 HSDL1Q3SXM5 330 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 RASIP1Q5U651 963 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 KCNB2Q92953 911 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 SPATA33Q96N06 139 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 ALG1Q9BT22 464 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 SEMA6BQ9H3T3 888 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 BCAS3Q9H6U6 928 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 PSTPIP2Q9H939 334 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 RBM28Q9NW13 759 aaKnown RBP30■■■□□ 2.39
NPLOC4-215ENST00000574095 STXBP5LQ9Y2K9 1186 aa30■■■□□ 2.39
NPLOC4-215ENST00000574095 HMGB1P09429 215 aaKnown RBP29.99■■■□□ 2.39
NPLOC4-215ENST00000574095 ZNF286BP0CG31 522 aa29.99■■■□□ 2.39
NPLOC4-215ENST00000574095 HSPA4P34932 840 aa29.99■■■□□ 2.39
NPLOC4-215ENST00000574095 PSEN2P49810 448 aa29.99■■■□□ 2.39
NPLOC4-215ENST00000574095 RTN1Q16799 776 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms