RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 PIGSQ96S52 555 aa24.53■■□□□ 1.52
CHRNB1-206ENST00000574054 MRVI1Q9Y6F6 885 aa24.53■■□□□ 1.52
CHRNB1-206ENST00000574054 SLC4A7Q9Y6M7 1214 aa24.53■■□□□ 1.52
CHRNB1-206ENST00000574054 PTPN11Q06124 597 aaPredicted RBP24.52■■□□□ 1.52
CHRNB1-206ENST00000574054 RETREG2Q8NC44 543 aa24.52■■□□□ 1.52
CHRNB1-206ENST00000574054 RBM8AQ9Y5S9 174 aaKnown RBP24.52■■□□□ 1.52
CHRNB1-206ENST00000574054 CHD7Q9P2D1 2997 aa24.51■■□□□ 1.51
CHRNB1-206ENST00000574054 TRAF1Q13077 416 aa24.51■■□□□ 1.51
CHRNB1-206ENST00000574054 PIBF1Q8WXW3 757 aa24.51■■□□□ 1.51
CHRNB1-206ENST00000574054 MAP4K1Q92918 833 aa24.51■■□□□ 1.51
CHRNB1-206ENST00000574054 NKX2-4Q9H2Z4 354 aa24.51■■□□□ 1.51
CHRNB1-206ENST00000574054 RIOX1Q9H6W3 641 aa24.51■■□□□ 1.51
CHRNB1-206ENST00000574054 DDX41Q9UJV9 622 aaKnown RBP24.51■■□□□ 1.51
CHRNB1-206ENST00000574054 BAZ2BQ9UIF8 2168 aaKnown RBP24.51■■□□□ 1.51
CHRNB1-206ENST00000574054 GCOM1H8Y6P7 765 aaPredicted RBP24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 PFKMP08237 780 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 POLR2MP0CAP2 368 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 CASTP20810 708 aaKnown RBP24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 ANTXR2P58335 489 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 GHRHRQ02643 423 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 TROAPQ12815 778 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 DGKDQ16760 1214 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 FCHSD1Q86WN1 690 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 VWCEQ96DN2 955 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 PDCD2LQ9BRP1 358 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 MAP3K20Q9NYL2 800 aaKnown RBP24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 MYO9BQ13459 2157 aa24.5■■□□□ 1.51
CHRNB1-206ENST00000574054 CYTH3O43739 400 aa24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 SORBS3O60504 671 aa24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 RABGGTBP53611 331 aa24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 BFSP2Q13515 415 aa24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 PTGISQ16647 500 aa24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 DHX37Q8IY37 1157 aaKnown RBP24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 MB21D2Q8IYB1 491 aaPredicted RBP24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 GAS2L1Q99501 681 aaPredicted RBP24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 PRDM12Q9H4Q4 367 aa24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 YBX2Q9Y2T7 364 aaKnown RBP24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 KIAA1217Q5T5P2 1943 aa24.49■■□□□ 1.51
CHRNB1-206ENST00000574054 PNMA6FA0A0J9YX94 578 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 PITPNM1O00562 1244 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 LAMC2Q13753 1193 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 PGM5Q15124 567 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 SAMD3Q8N6K7 520 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 IL31RAQ8NI17 732 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 IGDCC4Q8TDY8 1250 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 KAT2BQ92831 832 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 FTOQ9C0B1 505 aaKnown RBP eCLIP24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 SLC28A3Q9HAS3 691 aa24.48■■□□□ 1.51
CHRNB1-206ENST00000574054 ZNF286BP0CG31 522 aa24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 ACTN1P12814 892 aa24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 ATP2A2P16615 1042 aaKnown RBP24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 RFC2P35250 354 aa24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 GDF6Q6KF10 455 aaPredicted RBP24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 CASC1Q6TDU7 716 aa24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 CCDC155Q8N6L0 562 aa24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 PPTC7Q8NI37 304 aa24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 EMID1Q96A84 441 aaPredicted RBP24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 ALG1Q9BT22 464 aa24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 COL25A1Q9BXS0 654 aaPredicted RBP24.47■■□□□ 1.51
CHRNB1-206ENST00000574054 RGS20O76081 388 aa24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 IQCF3P0C7M6 154 aa24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 CCND2P30279 289 aa24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 PSEN2P49810 448 aa24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 VSIG10LQ86VR7 867 aa24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 C7orf31Q8N865 590 aa24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 ZFP91Q96JP5 570 aaPredicted RBP24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 MYL10Q9BUA6 226 aa24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 LY9Q9HBG7 655 aa24.46■■□□□ 1.51
CHRNB1-206ENST00000574054 SCN5AQ14524 2016 aa24.45■■□□□ 1.51
CHRNB1-206ENST00000574054 PRC1O43663 620 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 MYOGP15173 224 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 KCNV1Q6PIU1 500 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 NFXL1Q6ZNB6 911 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 SESTD1Q86VW0 696 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 ZNF654Q8IZM8 581 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 USP38Q8NB14 1042 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 CTCFLQ8NI51 663 aaPredicted RBP24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 SPATA33Q96N06 139 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 KATNAL1Q9BW62 490 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 VCANP13611 3396 aa24.45■■□□□ 1.5
CHRNB1-206ENST00000574054 GGPS1O95749 300 aa24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 KIF5BP33176 963 aa24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 MFSD10Q14728 455 aa24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 CELF3Q5SZQ8 465 aaKnown RBP24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 PPP2R2DQ66LE6 453 aa24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 CAGE1Q8TC20 777 aa24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 PPM1EQ8WY54 764 aa24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 LSG1Q9H089 658 aaKnown RBP24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 HDAC6Q9UBN7 1215 aa24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 PCDHA11Q9Y5I1 949 aa24.44■■□□□ 1.5
CHRNB1-206ENST00000574054 DDAH1O94760 285 aa24.43■■□□□ 1.5
CHRNB1-206ENST00000574054 UBA1P22314 1058 aaKnown RBP24.43■■□□□ 1.5
CHRNB1-206ENST00000574054 KIAA0753Q2KHM9 967 aa24.43■■□□□ 1.5
CHRNB1-206ENST00000574054 RRP36Q96EU6 259 aaKnown RBP24.43■■□□□ 1.5
CHRNB1-206ENST00000574054 CTAGE1Q96RT6 745 aa24.43■■□□□ 1.5
CHRNB1-206ENST00000574054 ESYT1Q9BSJ8 1104 aa24.43■■□□□ 1.5
CHRNB1-206ENST00000574054 GTF2IRD1Q9UHL9 959 aa24.43■■□□□ 1.5
CHRNB1-206ENST00000574054 F2P00734 622 aa24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 IGFBP4P22692 258 aa24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 MCM5P33992 734 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms