RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 MAP2K2P36507 400 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 CEP135Q66GS9 1140 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 AK8Q96MA6 479 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 KBTBD4Q9NVX7 518 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 GJA3Q9Y6H8 435 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 CNTNAP1P78357 1384 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 BMP3P12645 472 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 CCT6AP40227 531 aaKnown RBP17.84■□□□□ 0.45
USP43-204ENST00000573955 TGFB2P61812 414 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 PAK1Q13153 545 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 SPDYE2Q495Y8 402 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 KIAA1755Q5JYT7 1200 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 MCTP2Q6DN12 878 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 SUGP1Q8IWZ8 645 aaKnown RBP17.84■□□□□ 0.45
USP43-204ENST00000573955 IGSF22Q8N9C0 903 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 ANKRD20A12PQ8NF67 263 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 NUDT12Q9BQG2 462 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 RMND1Q9NWS8 449 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 ASTN2O75129 1339 aaPredicted RBP17.84■□□□□ 0.45
USP43-204ENST00000573955 MYO1BO43795 1136 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 FAM151AQ8WW52 585 aa17.84■□□□□ 0.45
USP43-204ENST00000573955 CLSTN1O94985 981 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 CALRP27797 417 aaKnown RBP17.83■□□□□ 0.44
USP43-204ENST00000573955 PLA2G4AP47712 749 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 ASIC1P78348 528 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 SYDE2Q5VT97 1194 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 GMCL1P1Q8NEA9 526 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 EEF2KMTQ96G04 330 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 CALML4Q96GE6 196 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 HERC5Q9UII4 1024 aaKnown RBP17.83■□□□□ 0.44
USP43-204ENST00000573955 PPP1R12AO14974 1030 aaPredicted RBP17.83■□□□□ 0.44
USP43-204ENST00000573955 KLRC4O43908 158 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 ADKP55263 362 aaKnown RBP17.83■□□□□ 0.44
USP43-204ENST00000573955 HPS3Q969F9 1004 aa17.83■□□□□ 0.44
USP43-204ENST00000573955 MYH7BA7E2Y1 1941 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 PNMA6AP0CW24 399 aaPredicted RBP17.82■□□□□ 0.44
USP43-204ENST00000573955 FBXO11Q86XK2 927 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 GMCL1Q96IK5 515 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 CDK5RAP3Q96JB5 506 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 P2RX7Q99572 595 aaKnown RBP17.82■□□□□ 0.44
USP43-204ENST00000573955 HOXA13P31271 388 aaPredicted RBP17.82■□□□□ 0.44
USP43-204ENST00000573955 PMS1P54277 932 aaKnown RBP17.82■□□□□ 0.44
USP43-204ENST00000573955 GRB10Q13322 594 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 MCM6Q14566 821 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 FAM83BQ5T0W9 1011 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 CDKAL1Q5VV42 579 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 SNX29Q8TEQ0 813 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 HAS1Q92839 578 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 AMNQ9BXJ7 453 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 ANO3Q9BYT9 981 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 ZBTB21Q9ULJ3 1066 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 PSME4Q14997 1843 aa17.82■□□□□ 0.44
USP43-204ENST00000573955 SPECC1LQ69YQ0 1117 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 APTXQ7Z2E3 356 aaKnown RBP17.81■□□□□ 0.44
USP43-204ENST00000573955 CCAR2Q8N163 923 aaKnown RBP17.81■□□□□ 0.44
USP43-204ENST00000573955 CPLX3Q8WVH0 158 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 JDP2Q8WYK2 163 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 GLIS2Q9BZE0 524 aaPredicted RBP17.81■□□□□ 0.44
USP43-204ENST00000573955 TRIM9Q9C026 710 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 RWDD2AQ9UIY3 292 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 WNT10BO00744 389 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 MEIS2O14770 477 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 NR1I3Q14994 352 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 DYMQ7RTS9 669 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 SAMD7Q7Z3H4 446 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 PNMA5Q96PV4 448 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 PRR12Q9ULL5 1215 aa17.81■□□□□ 0.44
USP43-204ENST00000573955 A0A1B0GTH6 734 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 FCER1AP12319 257 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 FXR2P51116 673 aaKnown RBP eCLIP17.8■□□□□ 0.44
USP43-204ENST00000573955 PDE4DQ08499 809 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 E4F1Q66K89 784 aaPredicted RBP17.8■□□□□ 0.44
USP43-204ENST00000573955 CIAPIN1Q6FI81 312 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 CCDC174Q6PII3 467 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 VPS16Q9H269 839 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 KIF13BQ9NQT8 1826 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 H2AFXP16104 143 aaPredicted RBP17.8■□□□□ 0.44
USP43-204ENST00000573955 ORC2Q13416 577 aaPredicted RBP17.8■□□□□ 0.44
USP43-204ENST00000573955 PPP4R3AQ6IN85 833 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 KCNK18Q7Z418 384 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 RPAINQ86UA6 219 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 PPM1EQ8WY54 764 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 BLOC1S4Q9NUP1 217 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 TAB2Q9NYJ8 693 aa17.8■□□□□ 0.44
USP43-204ENST00000573955 NRDCO43847 1150 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 KRT79Q5XKE5 535 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 ADSSL1Q8N142 457 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 AGBL3Q8NEM8 1001 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 KIFC2Q96AC6 838 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 CEP89Q96ST8 783 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 RAB34Q9BZG1 259 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 MYOZ2Q9NPC6 264 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 EXOC1Q9NV70 894 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 FZD1Q9UP38 647 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 ARFGEF1Q9Y6D6 1849 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 SLU7O95391 586 aaKnown RBP17.79■□□□□ 0.44
USP43-204ENST00000573955 STAT2P52630 851 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 STK4Q13043 487 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms