RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SEC63Q9UGP8 760 aaKnown RBP21.14■□□□□ 0.98
SCARF1-206ENST00000573852 EDIL3O43854 480 aa21.14■□□□□ 0.97
SCARF1-206ENST00000573852 TCP1P17987 556 aaKnown RBP21.14■□□□□ 0.97
SCARF1-206ENST00000573852 CALCRLQ16602 461 aa21.14■□□□□ 0.97
SCARF1-206ENST00000573852 SKIDA1Q1XH10 827 aa21.14■□□□□ 0.97
SCARF1-206ENST00000573852 LRRC55Q6ZSA7 311 aa21.14■□□□□ 0.97
SCARF1-206ENST00000573852 NUDT12Q9BQG2 462 aa21.14■□□□□ 0.97
SCARF1-206ENST00000573852 ANKIB1Q9P2G1 1089 aa21.14■□□□□ 0.97
SCARF1-206ENST00000573852 SLC37A4O43826 429 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 GSTO1P78417 241 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 GFPT1Q06210 699 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-206ENST00000573852 LRRC41Q15345 812 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 ASTE1Q2TB18 679 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-206ENST00000573852 ALS2CR12Q96Q35 445 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 STK17AQ9UEE5 414 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 PJA2O43164 708 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 HAUS3Q68CZ6 603 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 NEDD1Q8NHV4 660 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 MTMR8Q96EF0 704 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 GPR101Q96P66 508 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-206ENST00000573852 TLR10Q9BXR5 811 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 NARFQ9UHQ1 456 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 ABCB11O95342 1321 aa21.13■□□□□ 0.97
SCARF1-206ENST00000573852 POTEMA6NI47 508 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 CORO7P57737 925 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 PDXDC1Q6P996 788 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 C16orf86Q6ZW13 317 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 KCNK18Q7Z418 384 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 CEP95Q96GE4 821 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 RTFDC1Q9BY42 306 aaPredicted RBP21.12■□□□□ 0.97
SCARF1-206ENST00000573852 SBF2Q86WG5 1849 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 USP17L5A8MUK1 530 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 TDP2O95551 362 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 MAGEA9P43362 315 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 FXR2P51116 673 aaKnown RBP eCLIP21.12■□□□□ 0.97
SCARF1-206ENST00000573852 RASSF7Q02833 373 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 PLCD3Q8N3E9 789 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 CDK5RAP3Q96JB5 506 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 SLC1A4P43007 532 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 LRRC63Q05C16 580 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 KCNMA1Q12791 1236 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 CCDC181Q5TID7 509 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 HGSNATQ68CP4 663 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 TPTE2Q6XPS3 522 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 TSEN2Q8NCE0 465 aaKnown RBP21.12■□□□□ 0.97
SCARF1-206ENST00000573852 RUBCNQ92622 972 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 RAD54LQ92698 747 aa21.12■□□□□ 0.97
SCARF1-206ENST00000573852 DDX60LQ5H9U9 1706 aaKnown RBP21.11■□□□□ 0.97
SCARF1-206ENST00000573852 BUB1O43683 1085 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 FGFR1OPO95684 399 aaKnown RBP21.11■□□□□ 0.97
SCARF1-206ENST00000573852 IRAK1P51617 712 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 ORC2Q13416 577 aaPredicted RBP21.11■□□□□ 0.97
SCARF1-206ENST00000573852 KLHDC7AQ5VTJ3 777 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 DDX12PQ92771 950 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 ZNF287Q9HBT7 754 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 STIM2Q9P246 746 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 COA7Q96BR5 231 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 MS4A14Q96JA4 679 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 SH3GL2Q99962 352 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 EHD4Q9H223 541 aa21.11■□□□□ 0.97
SCARF1-206ENST00000573852 RBM12Q9NTZ6 932 aaKnown RBP21.11■□□□□ 0.97
SCARF1-206ENST00000573852 CDK5RAP2Q96SN8 1893 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 CNTNAP4Q9C0A0 1308 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 ESYT2A0FGR8 921 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 BTDP43251 543 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 EHHADHQ08426 723 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 CACNA2D4Q7Z3S7 1137 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 LDHCP07864 332 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 SMARCA1P28370 1054 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 EPHB4P54760 987 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 NFIXQ14938 502 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 TMC4Q7Z404 712 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 SNX29Q8TEQ0 813 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 TANGO6Q9C0B7 1094 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 NLRC4Q9NPP4 1024 aa21.1■□□□□ 0.97
SCARF1-206ENST00000573852 NRAPQ86VF7 1730 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 RGL2O15211 777 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 PAFAH1B1P43034 410 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 TMEM266Q2M3C6 531 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 DNAJC21Q5F1R6 531 aaKnown RBP21.09■□□□□ 0.97
SCARF1-206ENST00000573852 RIOX1Q9H6W3 641 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 SPATA31A5Q5VU36 1347 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 FRMPD2Q68DX3 1309 aaPredicted RBP21.09■□□□□ 0.97
SCARF1-206ENST00000573852 SPATA31A7Q8IWB4 1347 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 PPFIA1Q13136 1202 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 ECM1Q16610 540 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 NOX5Q96PH1 765 aa21.09■□□□□ 0.97
SCARF1-206ENST00000573852 PTF1AQ7RTS3 328 aa21.08■□□□□ 0.97
SCARF1-206ENST00000573852 TEX11Q8IYF3 940 aa21.08■□□□□ 0.97
SCARF1-206ENST00000573852 COL24A1Q17RW2 1714 aa21.08■□□□□ 0.97
SCARF1-206ENST00000573852 SSU72P8A0A1W2PR75 194 aa21.08■□□□□ 0.96
SCARF1-206ENST00000573852 TLR2O60603 784 aa21.08■□□□□ 0.96
SCARF1-206ENST00000573852 PDIA5Q14554 519 aa21.08■□□□□ 0.96
SCARF1-206ENST00000573852 TDRD12Q587J7 1177 aaKnown RBP21.08■□□□□ 0.96
SCARF1-206ENST00000573852 C8orf74Q6P047 294 aa21.08■□□□□ 0.96
SCARF1-206ENST00000573852 EMBQ6PCB8 327 aa21.08■□□□□ 0.96
SCARF1-206ENST00000573852 ARL8AQ96BM9 186 aa21.08■□□□□ 0.96
SCARF1-206ENST00000573852 EDEM3Q9BZQ6 932 aa21.08■□□□□ 0.96
SCARF1-206ENST00000573852 LEMD3Q9Y2U8 911 aa21.08■□□□□ 0.96
SCARF1-206ENST00000573852 GOLGA8KD6RF30 607 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms