RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 RETREG2Q8NC44 543 aa25.65■■□□□ 1.7
SNF8-216ENST00000573795 DHX38Q92620 1227 aaKnown RBP25.65■■□□□ 1.7
SNF8-216ENST00000573795 ASB2Q96Q27 587 aa25.65■■□□□ 1.7
SNF8-216ENST00000573795 SLC9A7Q96T83 725 aa25.65■■□□□ 1.7
SNF8-216ENST00000573795 KRT23Q9C075 422 aa25.65■■□□□ 1.7
SNF8-216ENST00000573795 DDX41Q9UJV9 622 aaKnown RBP25.65■■□□□ 1.7
SNF8-216ENST00000573795 ACTN1P12814 892 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 CHMP4BP1P59074 171 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 BFSP2Q13515 415 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 PTGISQ16647 500 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 TMEM67Q5HYA8 995 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 CHST3Q7LGC8 479 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 MTMR8Q96EF0 704 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 PXMP2Q9NR77 195 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 CTNNA3Q9UI47 895 aa25.64■■□□□ 1.7
SNF8-216ENST00000573795 PRRC2BQ5JSZ5 2229 aaKnown RBP25.64■■□□□ 1.69
SNF8-216ENST00000573795 EPOPA6NHQ4 379 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 RBAK-RBAKDNI3L0D1 243 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 DHX16O60231 1041 aaKnown RBP25.63■■□□□ 1.69
SNF8-216ENST00000573795 HSD17B4P51659 736 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 SLC35G1Q2M3R5 365 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 ARHGEF16Q5VV41 709 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 CYB5R4Q7L1T6 521 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 EMID1Q96A84 441 aaPredicted RBP25.63■■□□□ 1.69
SNF8-216ENST00000573795 CNNM2Q9H8M5 875 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 NOD1Q9Y239 953 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 BDP1A6H8Y1 2624 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 NCOR1O75376 2440 aa25.63■■□□□ 1.69
SNF8-216ENST00000573795 TNFRSF10AO00220 468 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 RFXAPO00287 272 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 CFBP00751 764 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 NR3C2P08235 984 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 IFIT1BQ5T764 474 aaKnown RBP25.62■■□□□ 1.69
SNF8-216ENST00000573795 HERC6Q8IVU3 1022 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 CAGE1Q8TC20 777 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 PHOSPHO2Q8TCD6 241 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 UBAC1Q9BSL1 405 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 FTOQ9C0B1 505 aaKnown RBP eCLIP25.62■■□□□ 1.69
SNF8-216ENST00000573795 MAD2L2Q9UI95 211 aa25.62■■□□□ 1.69
SNF8-216ENST00000573795 EIF3JO75822 258 aaKnown RBP25.61■■□□□ 1.69
SNF8-216ENST00000573795 RGS20O76081 388 aa25.61■■□□□ 1.69
SNF8-216ENST00000573795 GSPT1P15170 499 aaKnown RBP25.61■■□□□ 1.69
SNF8-216ENST00000573795 PDE4AP27815 886 aa25.61■■□□□ 1.69
SNF8-216ENST00000573795 MRPS5P82675 430 aaKnown RBP25.61■■□□□ 1.69
SNF8-216ENST00000573795 RBL2Q08999 1139 aa25.61■■□□□ 1.69
SNF8-216ENST00000573795 AFAP1L1Q8TED9 768 aa25.61■■□□□ 1.69
SNF8-216ENST00000573795 YTHDC1Q96MU7 727 aaKnown RBP25.61■■□□□ 1.69
SNF8-216ENST00000573795 AMNQ9BXJ7 453 aa25.61■■□□□ 1.69
SNF8-216ENST00000573795 CERS4Q9HA82 394 aa25.61■■□□□ 1.69
SNF8-216ENST00000573795 GTF2IRD1Q9UHL9 959 aa25.61■■□□□ 1.69
SNF8-216ENST00000573795 COL4A4P53420 1690 aaPredicted RBP25.61■■□□□ 1.69
SNF8-216ENST00000573795 KLRF2D3W0D1 207 aa25.6■■□□□ 1.69
SNF8-216ENST00000573795 CASTP20810 708 aaKnown RBP25.6■■□□□ 1.69
SNF8-216ENST00000573795 TAP1Q03518 808 aa25.6■■□□□ 1.69
SNF8-216ENST00000573795 DGKDQ16760 1214 aa25.6■■□□□ 1.69
SNF8-216ENST00000573795 HDAC6Q9UBN7 1215 aa25.6■■□□□ 1.69
SNF8-216ENST00000573795 PALM3A6NDB9 673 aaPredicted RBP25.59■■□□□ 1.69
SNF8-216ENST00000573795 HAS3O00219 553 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 BAIAP3O94812 1187 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 F2P00734 622 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 POU3F3P20264 500 aaPredicted RBP25.59■■□□□ 1.69
SNF8-216ENST00000573795 PSEN2P49810 448 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 TCTN1Q2MV58 587 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 SPRED2Q7Z698 418 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 MICALL1Q8N3F8 863 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 CCDC155Q8N6L0 562 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 ADAMTS19Q8TE59 1207 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 PDCD2LQ9BRP1 358 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 MTCH2Q9Y6C9 303 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 MRVI1Q9Y6F6 885 aa25.59■■□□□ 1.69
SNF8-216ENST00000573795 BAZ2BQ9UIF8 2168 aaKnown RBP25.59■■□□□ 1.69
SNF8-216ENST00000573795 ZBTB5O15062 677 aa25.58■■□□□ 1.69
SNF8-216ENST00000573795 ZNF286BP0CG31 522 aa25.58■■□□□ 1.69
SNF8-216ENST00000573795 HOXD8P13378 290 aaPredicted RBP25.58■■□□□ 1.69
SNF8-216ENST00000573795 SELPP16109 830 aa25.58■■□□□ 1.69
SNF8-216ENST00000573795 STOX1Q6ZVD7 989 aa25.58■■□□□ 1.69
SNF8-216ENST00000573795 LRRC8DQ7L1W4 858 aa25.58■■□□□ 1.69
SNF8-216ENST00000573795 IL31RAQ8NI17 732 aa25.58■■□□□ 1.69
SNF8-216ENST00000573795 PPTC7Q8NI37 304 aa25.58■■□□□ 1.69
SNF8-216ENST00000573795 WNT8BQ93098 351 aa25.58■■□□□ 1.69
SNF8-216ENST00000573795 TCF20Q9UGU0 1960 aaKnown RBP25.58■■□□□ 1.69
SNF8-216ENST00000573795 NBNO60934 754 aa25.57■■□□□ 1.68
SNF8-216ENST00000573795 CXCL10P02778 98 aa25.57■■□□□ 1.68
SNF8-216ENST00000573795 WDR5P61964 334 aaKnown RBP25.57■■□□□ 1.68
SNF8-216ENST00000573795 LAMC2Q13753 1193 aa25.57■■□□□ 1.68
SNF8-216ENST00000573795 TRIM71Q2Q1W2 868 aaKnown RBP25.57■■□□□ 1.68
SNF8-216ENST00000573795 KRT40Q6A162 431 aa25.57■■□□□ 1.68
SNF8-216ENST00000573795 TRAF7Q6Q0C0 670 aa25.57■■□□□ 1.68
SNF8-216ENST00000573795 ALG1Q9BT22 464 aa25.57■■□□□ 1.68
SNF8-216ENST00000573795 SENP2Q9HC62 589 aa25.57■■□□□ 1.68
SNF8-216ENST00000573795 TAF6LQ9Y6J9 622 aa25.57■■□□□ 1.68
SNF8-216ENST00000573795 CKBP12277 381 aa25.56■■□□□ 1.68
SNF8-216ENST00000573795 HOXA13P31271 388 aaPredicted RBP25.56■■□□□ 1.68
SNF8-216ENST00000573795 HIC1Q14526 733 aa25.56■■□□□ 1.68
SNF8-216ENST00000573795 MFSD10Q14728 455 aa25.56■■□□□ 1.68
SNF8-216ENST00000573795 TTC22Q5TAA0 569 aa25.56■■□□□ 1.68
SNF8-216ENST00000573795 TMCO2Q7Z6W1 182 aaPredicted RBP25.56■■□□□ 1.68
SNF8-216ENST00000573795 PCDHA1Q9Y5I3 950 aa25.56■■□□□ 1.68
SNF8-216ENST00000573795 LCHNA4D1U4 455 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 CYP21A2P08686 494 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms