RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 TRIM5Q9C035 493 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 HOMER2Q9NSB8 354 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 RMND1Q9NWS8 449 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 RABGAP1Q9Y3P9 1069 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 MSH4O15457 936 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 RPN1P04843 607 aaKnown RBP23.1■■□□□ 1.29
CHRNE-202ENST00000572438 ZNF75DP51815 510 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 TMEM119Q4V9L6 283 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 HS1BP3Q53T59 392 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 PLA2G4DQ86XP0 818 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 CYP2W1Q8TAV3 490 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.1■■□□□ 1.29
CHRNE-202ENST00000572438 PARP14Q460N5 1801 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 MYPNQ86TC9 1320 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 OTOFQ9HC10 1997 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 SLC26A4O43511 780 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 CNKSR2Q8WXI2 1034 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 TRERF1Q96PN7 1200 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 UIMC1Q96RL1 719 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 NUDT12Q9BQG2 462 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 ELP3Q9H9T3 547 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 RPTORQ8N122 1335 aa23.09■■□□□ 1.29
CHRNE-202ENST00000572438 PPATQ06203 517 aa23.08■■□□□ 1.29
CHRNE-202ENST00000572438 TTLL12Q14166 644 aaPredicted RBP23.08■■□□□ 1.29
CHRNE-202ENST00000572438 HOXC10Q9NYD6 342 aa23.08■■□□□ 1.29
CHRNE-202ENST00000572438 COL20A1Q9P218 1284 aa23.08■■□□□ 1.29
CHRNE-202ENST00000572438 RLFQ13129 1914 aa23.08■■□□□ 1.28
CHRNE-202ENST00000572438 ERCC5P28715 1186 aaPredicted RBP23.08■■□□□ 1.28
CHRNE-202ENST00000572438 UBXN2AP68543 259 aa23.08■■□□□ 1.28
CHRNE-202ENST00000572438 AMPD3Q01432 767 aa23.08■■□□□ 1.28
CHRNE-202ENST00000572438 SPIRE1Q08AE8 756 aa23.08■■□□□ 1.28
CHRNE-202ENST00000572438 HYIQ5T013 277 aa23.08■■□□□ 1.28
CHRNE-202ENST00000572438 ERO1BQ86YB8 467 aa23.08■■□□□ 1.28
CHRNE-202ENST00000572438 SYTL5Q8TDW5 730 aaPredicted RBP23.08■■□□□ 1.28
CHRNE-202ENST00000572438 BLOC1S4Q9NUP1 217 aa23.08■■□□□ 1.28
CHRNE-202ENST00000572438 KDM3AQ9Y4C1 1321 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 ATP2A1O14983 1001 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 SEMA3FQ13275 785 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 CEP55Q53EZ4 464 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 MOB2Q70IA6 237 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 CLMNQ96JQ2 1002 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 C7orf25Q9BPX7 421 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 RNF146Q9NTX7 359 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 ZNF214Q9UL59 606 aaPredicted RBP23.07■■□□□ 1.28
CHRNE-202ENST00000572438 WDR90Q96KV7 1748 aa23.07■■□□□ 1.28
CHRNE-202ENST00000572438 SPDYE5A6NIY4 337 aa23.06■■□□□ 1.28
CHRNE-202ENST00000572438 SPDYE16A6NNV3 312 aaPredicted RBP23.06■■□□□ 1.28
CHRNE-202ENST00000572438 PTMAP06454 111 aaKnown RBP23.06■■□□□ 1.28
CHRNE-202ENST00000572438 CCT6AP40227 531 aaKnown RBP23.06■■□□□ 1.28
CHRNE-202ENST00000572438 STAT3P40763 770 aa23.06■■□□□ 1.28
CHRNE-202ENST00000572438 KCNB1Q14721 858 aa23.06■■□□□ 1.28
CHRNE-202ENST00000572438 SNRNP48Q6IEG0 339 aaKnown RBP23.06■■□□□ 1.28
CHRNE-202ENST00000572438 SV2BQ7L1I2 683 aa23.06■■□□□ 1.28
CHRNE-202ENST00000572438 ENOX1Q8TC92 643 aaKnown RBP23.06■■□□□ 1.28
CHRNE-202ENST00000572438 LARP4BQ92615 738 aaKnown RBP23.06■■□□□ 1.28
CHRNE-202ENST00000572438 RAD54LQ92698 747 aa23.06■■□□□ 1.28
CHRNE-202ENST00000572438 TRIM9Q9C026 710 aa23.06■■□□□ 1.28
CHRNE-202ENST00000572438 NT5C3AQ9H0P0 336 aa23.06■■□□□ 1.28
CHRNE-202ENST00000572438 RPS6P62753 249 aaKnown RBP23.05■■□□□ 1.28
CHRNE-202ENST00000572438 FMR1Q06787 632 aaKnown RBP eCLIP23.05■■□□□ 1.28
CHRNE-202ENST00000572438 TMEM132BQ14DG7 1078 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 ZNF658Q5TYW1 1059 aaPredicted RBP23.05■■□□□ 1.28
CHRNE-202ENST00000572438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.05■■□□□ 1.28
CHRNE-202ENST00000572438 OTUD5Q96G74 571 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 HSD3B7Q9H2F3 369 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 VAV3Q9UKW4 847 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 RIPK3Q9Y572 518 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 STK24Q9Y6E0 443 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 MEIS1O00470 390 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 IRF6O14896 467 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 KLRC4O43908 158 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 CD44P16070 742 aaKnown RBP23.05■■□□□ 1.28
CHRNE-202ENST00000572438 SETQ01105 290 aaPredicted RBP23.05■■□□□ 1.28
CHRNE-202ENST00000572438 ECM1Q16610 540 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 TREML2Q5T2D2 321 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 HAUS3Q68CZ6 603 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 RNF207Q6ZRF8 634 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 ARMC9Q7Z3E5 817 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 ERMNQ8TAM6 284 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 FRMPD4Q14CM0 1322 aa23.05■■□□□ 1.28
CHRNE-202ENST00000572438 A0A0G2JLL6 359 aaPredicted RBP23.04■■□□□ 1.28
CHRNE-202ENST00000572438 PPP1R3GB7ZBB8 358 aa23.04■■□□□ 1.28
CHRNE-202ENST00000572438 CXCL11O14625 94 aa23.04■■□□□ 1.28
CHRNE-202ENST00000572438 MCM6Q14566 821 aa23.04■■□□□ 1.28
CHRNE-202ENST00000572438 SLC30A10Q6XR72 485 aa23.04■■□□□ 1.28
CHRNE-202ENST00000572438 PRRT2Q7Z6L0 340 aaPredicted RBP23.04■■□□□ 1.28
CHRNE-202ENST00000572438 SMYD4Q8IYR2 804 aaPredicted RBP23.04■■□□□ 1.28
CHRNE-202ENST00000572438 PROCA1Q8NCQ7 364 aaPredicted RBP23.04■■□□□ 1.28
CHRNE-202ENST00000572438 SLC5A5Q92911 643 aa23.04■■□□□ 1.28
CHRNE-202ENST00000572438 MRFAP1L1Q96HT8 127 aa23.04■■□□□ 1.28
CHRNE-202ENST00000572438 TEX13BQ9BXU2 312 aa23.04■■□□□ 1.28
CHRNE-202ENST00000572438 CDC25BP30305 580 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 TKFCQ3LXA3 575 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 KMT5BQ4FZB7 885 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 NCAPH2Q6IBW4 605 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 NSMFQ6X4W1 530 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 KCNK18Q7Z418 384 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 MXRA8Q9BRK3 442 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 LRRC27Q9C0I9 530 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 RHOBTB3O94955 611 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms