RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 CIITAP33076 1130 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 ALDH5A1P51649 535 aaPredicted RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 USP11P51784 963 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 CEBPZQ03701 1054 aaKnown RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 ZNF174Q15697 407 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 LETM2Q2VYF4 491 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 ARHGEF16Q5VV41 709 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 MCTP2Q6DN12 878 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 CLEC17AQ6ZS10 378 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 CCAR1Q8IX12 1150 aaKnown RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 NSUN6Q8TEA1 469 aaKnown RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 ZNF296Q8WUU4 475 aaPredicted RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 LENG9Q96B70 501 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 MBOAT7Q96N66 472 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 GABRQQ9UN88 632 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 TNPO2O14787 897 aaKnown RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 BAG4O95429 457 aaKnown RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 ITGB5P18084 799 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 MCM7P33993 719 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 TRAPPC10P48553 1259 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 NASPP49321 788 aaPredicted RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 MAP2K5Q13163 448 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 SF3A1Q15459 793 aaKnown RBP11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 TTC38Q5R3I4 469 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 ANO1Q5XXA6 986 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 PCNX4Q63HM2 1172 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 DNERQ8NFT8 737 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 CD99L2Q8TCZ2 262 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 MORC4Q8TE76 937 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 TMEM60Q9H2L4 133 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 RTEL1Q9NZ71 1219 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 FLRT1Q9NZU1 646 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 IVNS1ABPQ9Y6Y0 642 aa11.09□□□□□ -0.63
TOM1L1-210ENST00000572158 MEIS1O00470 390 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 CCNT1O60563 726 aaKnown RBP11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 HOXC6P09630 235 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 FCGRTP55899 365 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 IL17AQ16552 155 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 CCL14Q16627 93 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 PPP4R3AQ6IN85 833 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 LINC00301Q8NCQ3 95 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 GJA10Q969M2 543 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 MAML3Q96JK9 1138 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 RCOR1Q9UKL0 485 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 UBIAD1Q9Y5Z9 338 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 HTTP42858 3142 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 MCM3APO60318 1980 aa11.08□□□□□ -0.64
TOM1L1-210ENST00000572158 GABBR2O75899 941 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 ARP10275 920 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 MYCLP12524 364 aaPredicted RBP11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 PRKCZQ05513 592 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 SLC39A14Q15043 492 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 CEP55Q53EZ4 464 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 MOXD1Q6UVY6 613 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 MAMDC4Q6UXC1 1216 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 DPP9Q86TI2 863 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 LEO1Q8WVC0 666 aaPredicted RBP11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 HAS1Q92839 578 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 ZNF396Q96N95 335 aaPredicted RBP11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 MTMR9Q96QG7 549 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 UIMC1Q96RL1 719 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 IWS1Q96ST2 819 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 WDR11Q9BZH6 1224 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 KATNBL1Q9H079 304 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 NOL7Q9UMY1 257 aaKnown RBP11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 DIS3Q9Y2L1 958 aaKnown RBP11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 ATP6V1DQ9Y5K8 247 aa11.07□□□□□ -0.64
TOM1L1-210ENST00000572158 FKTNO75072 461 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 CYP2B6P20813 491 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 FLT3LGP49771 235 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 GRIN1Q05586 938 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 PTGDRQ13258 359 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 Q4G0T1 1027 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 PRR16Q569H4 304 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 TMEM63BQ5T3F8 832 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 ATL3Q6DD88 541 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 XRRA1Q6P2D8 792 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 ARMCX2Q7L311 632 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 ZNF467Q7Z7K2 595 aaPredicted RBP11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 INPP4AQ96PE3 977 aaPredicted RBP11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 NUDT12Q9BQG2 462 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 MXRA8Q9BRK3 442 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 BCAS3Q9H6U6 928 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 KCNMB3Q9NPA1 279 aa11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 ADD3Q9UEY8 706 aaKnown RBP11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 DDX25Q9UHL0 483 aaKnown RBP11.06□□□□□ -0.64
TOM1L1-210ENST00000572158 MSH4O15457 936 aa11.05□□□□□ -0.64
TOM1L1-210ENST00000572158 FIBPO43427 364 aa11.05□□□□□ -0.64
TOM1L1-210ENST00000572158 ATP9AO75110 1047 aa11.05□□□□□ -0.64
TOM1L1-210ENST00000572158 NCLP19338 710 aaKnown RBP11.05□□□□□ -0.64
TOM1L1-210ENST00000572158 MARCKSP29966 332 aaPredicted RBP11.05□□□□□ -0.64
TOM1L1-210ENST00000572158 CCND2P30279 289 aa11.05□□□□□ -0.64
TOM1L1-210ENST00000572158 KRT85P78386 507 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms