RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 ZNF200P98182 395 aaPredicted RBP22.48■■□□□ 1.19
NUP88-203ENST00000572019 MBTPS1Q14703 1052 aa22.48■■□□□ 1.19
NUP88-203ENST00000572019 MFSD6Q6ZSS7 791 aa22.48■■□□□ 1.19
NUP88-203ENST00000572019 AFAP1L1Q8TED9 768 aa22.48■■□□□ 1.19
NUP88-203ENST00000572019 KIF28PB7ZC32 967 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 GH1P01241 217 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 ZNF286BP0CG31 522 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 CKBP12277 381 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 SELPP16109 830 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 KCNJ6P48051 423 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 ADGRF4Q8IZF3 695 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 RGS22Q8NE09 1264 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 CAGE1Q8TC20 777 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 HLA-CQ95604 372 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 FAM122AQ96E09 287 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 C1QTNF1Q9BXJ1 281 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 SUGCTQ9HAC7 445 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 GTF2IRD1Q9UHL9 959 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 COG5Q9UP83 839 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 DOCK5Q9H7D0 1870 aa22.47■■□□□ 1.19
NUP88-203ENST00000572019 CXCL10P02778 98 aa22.46■■□□□ 1.19
NUP88-203ENST00000572019 RBL2Q08999 1139 aa22.46■■□□□ 1.19
NUP88-203ENST00000572019 TRIM71Q2Q1W2 868 aaKnown RBP22.46■■□□□ 1.19
NUP88-203ENST00000572019 QRICH1Q2TAL8 776 aa22.46■■□□□ 1.19
NUP88-203ENST00000572019 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
NUP88-203ENST00000572019 MPHOSPH6Q99547 160 aaKnown RBP22.46■■□□□ 1.19
NUP88-203ENST00000572019 ALG1Q9BT22 464 aa22.46■■□□□ 1.19
NUP88-203ENST00000572019 DDX41Q9UJV9 622 aaKnown RBP22.46■■□□□ 1.19
NUP88-203ENST00000572019 PNMA2Q9UL42 364 aa22.46■■□□□ 1.19
NUP88-203ENST00000572019 BAZ2BQ9UIF8 2168 aaKnown RBP22.45■■□□□ 1.18
NUP88-203ENST00000572019 FAM86C2PA6NEL3 165 aa22.45■■□□□ 1.18
NUP88-203ENST00000572019 OPLAHO14841 1288 aa22.45■■□□□ 1.18
NUP88-203ENST00000572019 SORBS3O60504 671 aa22.45■■□□□ 1.18
NUP88-203ENST00000572019 EIF2AK2P19525 551 aaKnown RBP22.45■■□□□ 1.18
NUP88-203ENST00000572019 GPATCH4Q5T3I0 446 aaKnown RBP22.45■■□□□ 1.18
NUP88-203ENST00000572019 FAM117BQ6P1L5 589 aa22.45■■□□□ 1.18
NUP88-203ENST00000572019 CNKSR3Q6P9H4 555 aa22.45■■□□□ 1.18
NUP88-203ENST00000572019 PNMA1Q8ND90 353 aa22.45■■□□□ 1.18
NUP88-203ENST00000572019 RMDN3Q96TC7 470 aa22.45■■□□□ 1.18
NUP88-203ENST00000572019 ATG2AQ2TAZ0 1938 aa22.45■■□□□ 1.18
NUP88-203ENST00000572019 ABCB11O95342 1321 aa22.44■■□□□ 1.18
NUP88-203ENST00000572019 PSEN2P49810 448 aa22.44■■□□□ 1.18
NUP88-203ENST00000572019 NSUN6Q8TEA1 469 aaKnown RBP22.44■■□□□ 1.18
NUP88-203ENST00000572019 LINC01553A4QN01 128 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 B4E1Z4 1266 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 HAS3O00219 553 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 KDM4AO75164 1064 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 GJB5O95377 273 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 CASTP20810 708 aaKnown RBP22.43■■□□□ 1.18
NUP88-203ENST00000572019 STXBP2Q15833 593 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 ZNF618Q5T7W0 954 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.43■■□□□ 1.18
NUP88-203ENST00000572019 DGKHQ86XP1 1220 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 CCDC155Q8N6L0 562 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 ESR2Q92731 530 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 ZBED2Q9BTP6 218 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 OSBPL7Q9BZF2 842 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 LNPKQ9C0E8 428 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 JMJD4Q9H9V9 463 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 VAT1LQ9HCJ6 419 aa22.43■■□□□ 1.18
NUP88-203ENST00000572019 MYO7AQ13402 2215 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 B4DLN1 442 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 RGS20O76081 388 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 F2P00734 622 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 MRPL12P52815 198 aaKnown RBP22.42■■□□□ 1.18
NUP88-203ENST00000572019 MFSD10Q14728 455 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 DGKDQ16760 1214 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 KIAA0753Q2KHM9 967 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 ENAHQ8N8S7 591 aaPredicted RBP22.42■■□□□ 1.18
NUP88-203ENST00000572019 RILPL2Q969X0 211 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 ZFP91Q96JP5 570 aaPredicted RBP22.42■■□□□ 1.18
NUP88-203ENST00000572019 PXMP2Q9NR77 195 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 NLRC5Q86WI3 1866 aa22.42■■□□□ 1.18
NUP88-203ENST00000572019 TRIM6-TRIM34B2RNG4 842 aa22.41■■□□□ 1.18
NUP88-203ENST00000572019 PPP1R11O60927 126 aaPredicted RBP22.41■■□□□ 1.18
NUP88-203ENST00000572019 PCP11498 1178 aaKnown RBP22.41■■□□□ 1.18
NUP88-203ENST00000572019 ERVK-21P61565 698 aa22.41■■□□□ 1.18
NUP88-203ENST00000572019 MKRN4PQ13434 485 aaPredicted RBP22.41■■□□□ 1.18
NUP88-203ENST00000572019 STAG2Q8N3U4 1231 aa22.41■■□□□ 1.18
NUP88-203ENST00000572019 C7orf31Q8N865 590 aa22.41■■□□□ 1.18
NUP88-203ENST00000572019 IL31RAQ8NI17 732 aa22.41■■□□□ 1.18
NUP88-203ENST00000572019 EMID1Q96A84 441 aaPredicted RBP22.41■■□□□ 1.18
NUP88-203ENST00000572019 NR3C2P08235 984 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 SDSP20132 328 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 HOXD11P31277 338 aaPredicted RBP22.4■■□□□ 1.18
NUP88-203ENST00000572019 RRP1P56182 461 aaKnown RBP22.4■■□□□ 1.18
NUP88-203ENST00000572019 ARHGEF16Q5VV41 709 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 ANKS1AQ92625 1134 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 GPKOWQ92917 476 aaPredicted RBP eCLIP22.4■■□□□ 1.18
NUP88-203ENST00000572019 IWS1Q96ST2 819 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 RAD9AQ99638 391 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 C17orf80Q9BSJ5 609 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 BCAS3Q9H6U6 928 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 MRVI1Q9Y6F6 885 aa22.4■■□□□ 1.18
NUP88-203ENST00000572019 ABHD14A-ACY1A0A1B0GW23 586 aa22.39■■□□□ 1.17
NUP88-203ENST00000572019 CFBP00751 764 aa22.39■■□□□ 1.17
NUP88-203ENST00000572019 SP2Q02086 613 aa22.39■■□□□ 1.17
NUP88-203ENST00000572019 PTK7Q13308 1070 aa22.39■■□□□ 1.17
NUP88-203ENST00000572019 HDAC1Q13547 482 aaPredicted RBP22.39■■□□□ 1.17
NUP88-203ENST00000572019 SLC35G1Q2M3R5 365 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms