RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 NSUN7Q8NE18 718 aaKnown RBP15.88■□□□□ 0.13
RPAIN-209ENST00000571558 CHST13Q8NET6 341 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 SMARCC2Q8TAQ2 1214 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 LLPHQ9BRT6 129 aaKnown RBP15.88■□□□□ 0.13
RPAIN-209ENST00000571558 RBM28Q9NW13 759 aaKnown RBP15.88■□□□□ 0.13
RPAIN-209ENST00000571558 YBX2Q9Y2T7 364 aaKnown RBP15.88■□□□□ 0.13
RPAIN-209ENST00000571558 HCN4Q9Y3Q4 1203 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 RIPK3Q9Y572 518 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 SLC4A7Q9Y6M7 1214 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 DHX16O60231 1041 aaKnown RBP15.87■□□□□ 0.13
RPAIN-209ENST00000571558 PLEKHA8P1O95397 391 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 PFKMP08237 780 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 FDX1P10109 184 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 IFNAR1P17181 557 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 KIF5BP33176 963 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 ZNF543Q08ER8 600 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 SLC35G1Q2M3R5 365 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 PPP2R2DQ66LE6 453 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 SLFN13Q68D06 897 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 ARMCX2Q7L311 632 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 CTCFLQ8NI51 663 aaPredicted RBP15.87■□□□□ 0.13
RPAIN-209ENST00000571558 DCAF4Q8WV16 495 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 CHMP4CQ96CF2 233 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 COG5Q9UP83 839 aa15.87■□□□□ 0.13
RPAIN-209ENST00000571558 CTDP1Q9Y5B0 961 aaPredicted RBP15.87■□□□□ 0.13
RPAIN-209ENST00000571558 CCDC196A0A1B0GTZ2 297 aa15.86■□□□□ 0.13
RPAIN-209ENST00000571558 CTAGE5O15320 804 aa15.86■□□□□ 0.13
RPAIN-209ENST00000571558 ADCY6O43306 1168 aa15.86■□□□□ 0.13
RPAIN-209ENST00000571558 RAD21O60216 631 aa15.86■□□□□ 0.13
RPAIN-209ENST00000571558 JAK2O60674 1132 aa15.86■□□□□ 0.13
RPAIN-209ENST00000571558 DTNBO60941 627 aa15.86■□□□□ 0.13
RPAIN-209ENST00000571558 ASPRV1Q53RT3 343 aa15.86■□□□□ 0.13
RPAIN-209ENST00000571558 OTOP2Q7RTS6 562 aa15.86■□□□□ 0.13
RPAIN-209ENST00000571558 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
RPAIN-209ENST00000571558 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
RPAIN-209ENST00000571558 GTPBP6O43824 516 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-209ENST00000571558 ZEB2O60315 1214 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 PARP1P09874 1014 aaKnown RBP15.85■□□□□ 0.13
RPAIN-209ENST00000571558 GOLGA8HP0CJ92 632 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 DDIT3P35638 169 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 TNFAIP2Q03169 654 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 ITGA7Q13683 1181 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 GPATCH4Q5T3I0 446 aaKnown RBP15.85■□□□□ 0.13
RPAIN-209ENST00000571558 CMTR1Q8N1G2 835 aaKnown RBP15.85■□□□□ 0.13
RPAIN-209ENST00000571558 SPRYD3Q8NCJ5 442 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 KATNBL1Q9H079 304 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 SLC38A10Q9HBR0 1119 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 MTMR7Q9Y216 660 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 Q9Y3F1 56 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 PTPDC1A2A3K4 754 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 KLRF2D3W0D1 207 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 FDPSP14324 419 aaKnown RBP15.85■□□□□ 0.13
RPAIN-209ENST00000571558 SMARCA1P28370 1054 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 GNAQP50148 359 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-209ENST00000571558 CPXCR1Q8N123 301 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 FGD4Q96M96 766 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 NUP88Q99567 741 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-209ENST00000571558 NOC4LQ9BVI4 516 aaKnown RBP15.85■□□□□ 0.13
RPAIN-209ENST00000571558 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 FEM1BQ9UK73 627 aa15.85■□□□□ 0.13
RPAIN-209ENST00000571558 FRMPD2Q68DX3 1309 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-209ENST00000571558 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 REV3LO60673 3130 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 ASB14A6NK59 587 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 CPLX1O14810 134 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 CYTH3O43739 400 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 CDKL5O76039 1030 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 HSP90AA1P07900 732 aaKnown RBP15.84■□□□□ 0.13
RPAIN-209ENST00000571558 BMP3P12645 472 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 ATP2A2P16615 1042 aaKnown RBP15.84■□□□□ 0.13
RPAIN-209ENST00000571558 SLC1A4P43007 532 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 FSCN1Q16658 493 aaKnown RBP15.84■□□□□ 0.13
RPAIN-209ENST00000571558 CXCL17Q6UXB2 119 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 PHKBQ93100 1093 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 LZTS2Q9BRK4 669 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 LRFN3Q9BTN0 628 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 SPZ1Q9BXG8 430 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 AP5M1Q9H0R1 490 aa15.84■□□□□ 0.13
RPAIN-209ENST00000571558 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-209ENST00000571558 GNEQ9Y223 722 aaKnown RBP15.84■□□□□ 0.13
RPAIN-209ENST00000571558 STK36Q9NRP7 1315 aa15.83■□□□□ 0.13
RPAIN-209ENST00000571558 SUPT20HL2P0C7V6 817 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 TFF2Q03403 129 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 SKIV2LQ15477 1246 aaKnown RBP15.83■□□□□ 0.12
RPAIN-209ENST00000571558 TMEM31Q5JXX7 168 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 TTBK2Q6IQ55 1244 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 CPLX2Q6PUV4 134 aaKnown RBP15.83■□□□□ 0.12
RPAIN-209ENST00000571558 BTNL9Q6UXG8 535 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 KCTD1Q719H9 257 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 FAM133AQ8N9E0 248 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 NECAB3Q96P71 396 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-209ENST00000571558 CPVLQ9H3G5 476 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 GPCPD1Q9NPB8 672 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 MTCH2Q9Y6C9 303 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 PIEZO1Q92508 2521 aa15.83■□□□□ 0.12
RPAIN-209ENST00000571558 PLA2G6O60733 806 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 PPFIA3O75145 1194 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 GJB2P29033 226 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms