RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 VAMP4O75379 141 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 LINC00271P0C7V0 271 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 SP9P0CG40 484 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 SELPP16109 830 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 PLCG2P16885 1265 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 SHMT1P34896 483 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 CTNNB1P35222 781 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 NRIP1P48552 1158 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 CHMP4BP1P59074 171 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 TIMM10P62072 90 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 CNTN2Q02246 1040 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 LMNB2Q03252 620 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 MBTPS1Q14703 1052 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 LRRFIP1Q32MZ4 808 aaKnown RBP8.44□□□□□ -1.06
CHD3-213ENST00000571249 N4BP2L1Q5TBK1 243 aaPredicted RBP8.44□□□□□ -1.06
CHD3-213ENST00000571249 LRRC8DQ7L1W4 858 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 EEPD1Q7L9B9 569 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 ADGRA1Q86SQ6 560 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 CLEC10AQ8IUN9 316 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 SIAH1Q8IUQ4 282 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 MAGEB6Q8N7X4 407 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 FAM133AQ8N9E0 248 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 VN1R2Q8NFZ6 395 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 CLUAP1Q96AJ1 413 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 PARD6AQ9NPB6 346 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 HMG20BQ9P0W2 317 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 NOD1Q9Y239 953 aa8.44□□□□□ -1.06
CHD3-213ENST00000571249 MICAL3Q7RTP6 2002 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 SRRM3A6NNA2 597 aaPredicted RBP8.43□□□□□ -1.06
CHD3-213ENST00000571249 RAD21O60216 631 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 CIAO1O76071 339 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 NCLP19338 710 aaKnown RBP8.43□□□□□ -1.06
CHD3-213ENST00000571249 BMPR1AP36894 532 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 PPP4CP60510 307 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 EVX2Q03828 476 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 DDX10Q13206 875 aaKnown RBP8.43□□□□□ -1.06
CHD3-213ENST00000571249 PTGISQ16647 500 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 TAPT1Q6NXT6 567 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 PRR23BQ6ZRT6 265 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 AFAP1L1Q8TED9 768 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 LMAN2LQ9H0V9 348 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 LRP2BPQ9P2M1 347 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 SERPINB13Q9UIV8 391 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 USP18Q9UMW8 372 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 SPTA1P02549 2419 aa8.43□□□□□ -1.06
CHD3-213ENST00000571249 C2CD4DB7Z1M9 353 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 C5orf67F2Z3F1 127 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 MPHOSPH10O00566 681 aaKnown RBP8.42□□□□□ -1.06
CHD3-213ENST00000571249 PER2O15055 1255 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 AMHP03971 560 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 COPB2P35606 906 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 SHC2P98077 582 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 RALBP1Q15311 655 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 SNRNP48Q6IEG0 339 aaKnown RBP8.42□□□□□ -1.06
CHD3-213ENST00000571249 TRAF7Q6Q0C0 670 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 KDF1Q8NAX2 398 aaPredicted RBP8.42□□□□□ -1.06
CHD3-213ENST00000571249 SPATA5Q8NB90 893 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 XAGE2Q96GT9 111 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 PCMTD1Q96MG8 357 aaPredicted RBP8.42□□□□□ -1.06
CHD3-213ENST00000571249 S1PR5Q9H228 398 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 ERVK-5Q9HDB9 667 aa8.42□□□□□ -1.06
CHD3-213ENST00000571249 NLRC5Q86WI3 1866 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 CCER2I3L3R5 266 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 SLC30A4O14863 429 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 EFCAB14O75071 495 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 MMP1P03956 469 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 CKBP12277 381 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 PLCD1P51178 756 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 DYNLL1P63167 89 aaKnown RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 GDF6Q6KF10 455 aaPredicted RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 NAA16Q6N069 864 aaPredicted RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 NFRKBQ6P4R8 1299 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 ZC3H14Q6PJT7 736 aaKnown RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 UNQ6494/PRO21346Q6UXR6 183 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 FBXO16Q8IX29 292 aaPredicted RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 ANKRD35Q8N283 1001 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 DBF4BQ8NFT6 615 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 CAGE1Q8TC20 777 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 TOP1MTQ969P6 601 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 HNRNPABQ99729 332 aaKnown RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 RTP3Q9BQQ7 232 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 MTG1Q9BT17 334 aaPredicted RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 C11orf84Q9BUA3 381 aaPredicted RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 OSBPL7Q9BZF2 842 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 POLR3EQ9NVU0 708 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 LIMD1Q9UGP4 676 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 PLAGL2Q9UPG8 496 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.41□□□□□ -1.06
CHD3-213ENST00000571249 PIEZO2Q9H5I5 2752 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 FANCMQ8IYD8 2048 aa8.41□□□□□ -1.06
CHD3-213ENST00000571249 ASXL3Q9C0F0 2248 aa8.4□□□□□ -1.06
CHD3-213ENST00000571249 RB1P06400 928 aa8.4□□□□□ -1.06
CHD3-213ENST00000571249 IL15P40933 162 aaPredicted RBP8.4□□□□□ -1.06
CHD3-213ENST00000571249 MVPQ14764 893 aaKnown RBP8.4□□□□□ -1.06
CHD3-213ENST00000571249 AMHR2Q16671 573 aa8.4□□□□□ -1.06
CHD3-213ENST00000571249 SPECC1Q5M775 1068 aa8.4□□□□□ -1.06
CHD3-213ENST00000571249 IQSEC1Q6DN90 963 aa8.4□□□□□ -1.06
CHD3-213ENST00000571249 TTC6Q86TZ1 520 aa8.4□□□□□ -1.06
CHD3-213ENST00000571249 CPXCR1Q8N123 301 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms