RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 CDK7P50613 346 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 ANAPC15P60006 121 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
SMG6-206ENST00000570668 HABP4Q5JVS0 413 aaKnown RBP12.83□□□□□ -0.36
SMG6-206ENST00000570668 HEATR3Q7Z4Q2 680 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 OR6J1Q8NGC5 347 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 IL31RAQ8NI17 732 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 SMARCC2Q8TAQ2 1214 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 COPS5Q92905 334 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 UPF3BQ9BZI7 483 aaKnown RBP12.83□□□□□ -0.36
SMG6-206ENST00000570668 DDX41Q9UJV9 622 aaKnown RBP12.83□□□□□ -0.36
SMG6-206ENST00000570668 A0A0U1RQG5 324 aaPredicted RBP12.82□□□□□ -0.36
SMG6-206ENST00000570668 hCG_1984214I3L0E3 225 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 ARVCFO00192 962 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 PDIA3P30101 505 aaKnown RBP12.82□□□□□ -0.36
SMG6-206ENST00000570668 CCND2P30279 289 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 BMP8BP34820 402 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 MAGEA10P43363 369 aaPredicted RBP12.82□□□□□ -0.36
SMG6-206ENST00000570668 LY6KQ17RY6 165 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
SMG6-206ENST00000570668 WWC2Q6AWC2 1192 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 ZNF713Q8N859 430 aaPredicted RBP12.82□□□□□ -0.36
SMG6-206ENST00000570668 SLC43A3Q8NBI5 491 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 GPKOWQ92917 476 aaPredicted RBP eCLIP12.82□□□□□ -0.36
SMG6-206ENST00000570668 VTI1AQ96AJ9 217 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 IL17RAQ96F46 866 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 PDLIM7Q9NR12 457 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
SMG6-206ENST00000570668 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 MRVI1Q9Y6F6 885 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
SMG6-206ENST00000570668 A0A1W2PPC1 479 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 DCDC2CA8MYV0 355 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 KPNA6O60684 536 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 PQBP1O60828 265 aaKnown RBP12.81□□□□□ -0.36
SMG6-206ENST00000570668 STAM2O75886 525 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 GH1P01241 217 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 CLTBP09497 229 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 TGFB3P10600 412 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
SMG6-206ENST00000570668 PURAQ00577 322 aaKnown RBP12.81□□□□□ -0.36
SMG6-206ENST00000570668 ARHGAP1Q07960 439 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 FAAP100Q0VG06 881 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 NTRK3Q16288 839 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 XRRA1Q6P2D8 792 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 EMID1Q96A84 441 aaPredicted RBP12.81□□□□□ -0.36
SMG6-206ENST00000570668 ZNF274Q96GC6 653 aaPredicted RBP12.81□□□□□ -0.36
SMG6-206ENST00000570668 INPP4AQ96PE3 977 aaPredicted RBP12.81□□□□□ -0.36
SMG6-206ENST00000570668 SEZ6LQ9BYH1 1024 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 GRIN2DO15399 1336 aa12.81□□□□□ -0.36
SMG6-206ENST00000570668 TRIM43BA6NCK2 446 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 STXBP3O00186 592 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 KIAA0355O15063 1070 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 PRPF3O43395 683 aaKnown RBP12.8□□□□□ -0.36
SMG6-206ENST00000570668 NAPAP54920 295 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 ITGA7Q13683 1181 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 LAMC2Q13753 1193 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 PFKFB3Q16875 520 aaPredicted RBP12.8□□□□□ -0.36
SMG6-206ENST00000570668 GNPTABQ3T906 1256 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 PCNX4Q63HM2 1172 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 SH3RF1Q7Z6J0 888 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 AFG1LQ8WV93 481 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 TRIM43Q96BQ3 446 aaPredicted RBP12.8□□□□□ -0.36
SMG6-206ENST00000570668 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
SMG6-206ENST00000570668 MTG1Q9BT17 334 aaPredicted RBP12.8□□□□□ -0.36
SMG6-206ENST00000570668 ALDH8A1Q9H2A2 487 aaPredicted RBP12.8□□□□□ -0.36
SMG6-206ENST00000570668 RIC8AQ9NPQ8 531 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 PRDM5Q9NQX1 630 aaPredicted RBP12.8□□□□□ -0.36
SMG6-206ENST00000570668 PDRG1Q9NUG6 133 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 SCN10AQ9Y5Y9 1956 aa12.8□□□□□ -0.36
SMG6-206ENST00000570668 SPDYE3A6NKU9 549 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 SEC24BO95487 1268 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 MYL3P08590 195 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 SCG2P13521 617 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 IFNAR1P17181 557 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 ICAM3P32942 547 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 PSMC6P62333 389 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
SMG6-206ENST00000570668 MDM2Q00987 491 aaPredicted RBP12.79□□□□□ -0.36
SMG6-206ENST00000570668 SP2Q02086 613 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 PKN1Q16512 942 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 UBE2SQ16763 222 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 ZFP91Q96JP5 570 aaPredicted RBP12.79□□□□□ -0.36
SMG6-206ENST00000570668 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
SMG6-206ENST00000570668 GLT8D2Q9H1C3 349 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 NCOA5Q9HCD5 579 aaKnown RBP12.79□□□□□ -0.36
SMG6-206ENST00000570668 TMEM39AQ9NV64 488 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 TBX21Q9UL17 535 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 PCDHA6Q9UN73 950 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 PCDHA8Q9Y5H6 950 aa12.79□□□□□ -0.36
SMG6-206ENST00000570668 LTBP2Q14767 1821 aa12.78□□□□□ -0.36
SMG6-206ENST00000570668 ESYT2A0FGR8 921 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms