RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 FAM196BA6NMK8 535 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L15C9J2P7 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L13C9JLJ4 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L11C9JVI0 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L18D6R9N7 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L22D6RA61 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L17D6RBQ6 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L19D6RCP7 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L20D6RJB6 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 ZNF500O60304 480 aaPredicted RBP6.74□□□□□ -1.33
CYLD-216ENST00000569891 SARSP49591 514 aaKnown RBP6.74□□□□□ -1.33
CYLD-216ENST00000569891 PDE4DQ08499 809 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 USP17L24Q0WX57 530 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 NOL9Q5SY16 702 aaKnown RBP6.74□□□□□ -1.33
CYLD-216ENST00000569891 C11orf57Q6ZUT1 292 aaPredicted RBP6.74□□□□□ -1.33
CYLD-216ENST00000569891 MIGA2Q7L4E1 593 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 SH3RF1Q7Z6J0 888 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 IGSF22Q8N9C0 903 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 ZNF397Q8NF99 534 aaPredicted RBP6.74□□□□□ -1.33
CYLD-216ENST00000569891 WRNIP1Q96S55 665 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 NUP58Q9BVL2 599 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 NFE2L3Q9Y4A8 694 aa6.74□□□□□ -1.33
CYLD-216ENST00000569891 ATMQ13315 3056 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 PPP2R3AQ06190 1150 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 NBPF9Q3BBW0 867 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 SAMD1Q6SPF0 538 aaPredicted RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 UNC13DQ70J99 1090 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 PNMA8AQ86V59 439 aaPredicted RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 SPC24Q8NBT2 197 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 NAA15Q9BXJ9 866 aaKnown RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 TUFT1Q9NNX1 390 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 MYH4Q9Y623 1939 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 CNTNAP1P78357 1384 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 GAS7O60861 476 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
CYLD-216ENST00000569891 RPL13P26373 211 aaKnown RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 CLK2P49760 499 aaKnown RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 ALCAMQ13740 583 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 TTLL12Q14166 644 aaPredicted RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 KARSQ15046 597 aaKnown RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 CCDC174Q6PII3 467 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 LDHDQ86WU2 507 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 RDM1Q8NG50 284 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 TIPINQ9BVW5 301 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 THAP9Q9H5L6 903 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 LUC7LQ9NQ29 371 aaKnown RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 TBC1D22BQ9NU19 505 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 RHOBTB3O94955 611 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 PLCG1P19174 1290 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 BACE1P56817 501 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 MAP3K9P80192 1104 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 LRRC63Q05C16 580 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 PRR16Q569H4 304 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 ANGEL2Q5VTE6 544 aaKnown RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 KLHL10Q6JEL2 608 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 CNGA4Q8IV77 575 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 SPATA20Q8TB22 786 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 C12orf42Q96LP6 360 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 IWS1Q96ST2 819 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 RIT2Q99578 217 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 IFNKQ9P0W0 207 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 A0A0G2JMZ2 1700 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 MGAQ8IWI9 3026 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 PSDA5PKW4 1024 aaPredicted RBP6.73□□□□□ -1.33
CYLD-216ENST00000569891 FAM205CA6NFA0 338 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 IDEP14735 1019 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 SCP2P22307 547 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 EPS15P42566 896 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 EVX2Q03828 476 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 COG2Q14746 738 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 UBE2SQ16763 222 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 COBLL1Q53SF7 1204 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 FCHSD1Q86WN1 690 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 SPICE1Q8N0Z3 855 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 GOLGA5Q8TBA6 731 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 RAD54LQ92698 747 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 MTMR9Q96QG7 549 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 KBTBD4Q9NVX7 518 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 PPP1R9AQ9ULJ8 1098 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 PTPRFP10586 1907 aa6.73□□□□□ -1.33
CYLD-216ENST00000569891 UBE2Q2LH0YL09 131 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 OSBPP22059 807 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 CCND2P30279 289 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 SFNP31947 248 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 KCNJ6P48051 423 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 RASSF7Q02833 373 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 FASTKD5Q7L8L6 764 aaKnown RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 TMC6Q7Z403 805 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 POTEDQ86YR6 584 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 DHX40Q8IX18 779 aaKnown RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 C4orf32Q8N8J7 132 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 NACC1Q96RE7 527 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 SGIP1Q9BQI5 828 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 POLR3CQ9BUI4 534 aaPredicted RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 GGA3Q9NZ52 723 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 SEL1LQ9UBV2 794 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 ADD3Q9UEY8 706 aaKnown RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 PNMA3Q9UL41 463 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms