RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TECP42680 631 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PRCPP42785 496 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 SLC1A4P43007 532 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 TCP10Q12799 353 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PAK1Q13153 545 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PSMD2Q13200 908 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 GRB10Q13322 594 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 AP3B2Q13367 1082 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 STIM1Q13586 685 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 DLGAP5Q15398 846 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PTPN14Q15678 1187 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 CALCRLQ16602 461 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 QRICH1Q2TAL8 776 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 KMT5BQ4FZB7 885 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 DALRD3Q5D0E6 543 aaKnown RBP6.04□□□□□ -1.44
SF3B3-213ENST00000569687 TCP11X2Q5H9J9 407 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 CEP135Q66GS9 1140 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 KCTD1Q719H9 257 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 SV2BQ7L1I2 683 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 IRF2BP1Q8IU81 584 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 TMEM139Q8IV31 216 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 TC2NQ8N9U0 490 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 RBM46Q8TBY0 533 aaKnown RBP6.04□□□□□ -1.44
SF3B3-213ENST00000569687 LRRC15Q8TF66 581 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 NELFBQ8WX92 580 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 STAMQ92783 540 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 HAS1Q92839 578 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 CCDC47Q96A33 483 aaKnown RBP6.04□□□□□ -1.44
SF3B3-213ENST00000569687 CCDC51Q96ER9 411 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 CALML4Q96GE6 196 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PNMA5Q96PV4 448 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PANX2Q96RD6 677 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 AMNQ9BXJ7 453 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 TRIM34Q9BYJ4 488 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 TRIM9Q9C026 710 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 BLZF1Q9H2G9 400 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 SPON1Q9HCB6 807 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 BLOC1S4Q9NUP1 217 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 ZNF70Q9UC06 446 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PPP1R1BQ9UD71 204 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-213ENST00000569687 LRWD1Q9UFC0 647 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PGAP2Q9UHJ9 254 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 ZNRF3Q9ULT6 936 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PCDHGA4Q9Y5G9 962 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PCDHA1Q9Y5I3 950 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 SYNRGQ9UMZ2 1314 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 A0A1W2PQC6 194 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 BICDL2A1A5D9 508 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 GOLGA6L9A6NEM1 432 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 MOXD2PA6NHM9 499 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 AKR1B15C9JRZ8 316 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 PSMD14O00487 310 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 MEIS2O14770 477 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 TEX33O43247 280 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 ZSCAN12O43309 604 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 LILRB3O75022 631 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 NDUFB10O96000 172 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CYP3A4P08684 503 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 BMP3P12645 472 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CD46P15529 392 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 RFX1P22670 979 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CCNE1P24864 410 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 EEF1GP26641 437 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CIITAP33076 1130 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 TXKP42681 527 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CLCN6P51797 869 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 COPB1P53618 953 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CACNB3P54284 484 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 EIF6P56537 245 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 STX17P56962 302 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 ETF1P62495 437 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 JAG1P78504 1218 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 ATP2B2Q01814 1243 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 ICA1Q05084 483 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 EHHADHQ08426 723 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 RRP1BQ14684 758 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 KRT31Q15323 416 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CCDC96Q2M329 555 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 TMEM266Q2M3C6 531 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 Q4G0T1 1027 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 TMEM119Q4V9L6 283 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 SYDE2Q5VT97 1194 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 KRT79Q5XKE5 535 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CENPPQ6IPU0 288 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 KLHL10Q6JEL2 608 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 TTI2Q6NXR4 508 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 UNC13DQ70J99 1090 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 MTERF4Q7Z6M4 381 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 CLEC10AQ8IUN9 316 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 ZSCAN29Q8IWY8 852 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 REXO1L1PQ8IX06 675 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 TRMT44Q8IYL2 757 aaKnown RBP6.03□□□□□ -1.44
SF3B3-213ENST00000569687 ZNF710Q8N1W2 664 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 OGFOD1Q8N543 542 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 ANKRD20A12PQ8NF67 263 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 KIF18AQ8NI77 898 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 ZNF507Q8TCN5 953 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 PBXIP1Q96AQ6 731 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 PPP1R13BQ96KQ4 1090 aa6.03□□□□□ -1.44
SF3B3-213ENST00000569687 MAP7D2Q96T17 732 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms