RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 RPN1P04843 607 aaKnown RBP25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 ALAS1P13196 640 aa25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 IREB2P48200 963 aaKnown RBP25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 MUM1L1Q5H9M0 696 aa25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 HYIQ5T013 277 aa25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 COL20A1Q9P218 1284 aa25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 CSADQ9Y600 493 aa25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 MSH4O15457 936 aa25.33■■□□□ 1.65
VCPKMT-205ENST00000569518 SLC26A4O43511 780 aa25.33■■□□□ 1.65
VCPKMT-205ENST00000569518 FMR1Q06787 632 aaKnown RBP eCLIP25.33■■□□□ 1.65
VCPKMT-205ENST00000569518 SAMD3Q8N6K7 520 aa25.33■■□□□ 1.65
VCPKMT-205ENST00000569518 MAP3K20Q9NYL2 800 aaKnown RBP25.33■■□□□ 1.65
VCPKMT-205ENST00000569518 IQCA1LA6NCM1 817 aa25.33■■□□□ 1.64
VCPKMT-205ENST00000569518 ERCC5P28715 1186 aaPredicted RBP25.33■■□□□ 1.64
VCPKMT-205ENST00000569518 OAZ1P54368 228 aa25.33■■□□□ 1.64
VCPKMT-205ENST00000569518 COG2Q14746 738 aa25.33■■□□□ 1.64
VCPKMT-205ENST00000569518 MED15Q96RN5 788 aa25.33■■□□□ 1.64
VCPKMT-205ENST00000569518 RMND1Q9NWS8 449 aa25.33■■□□□ 1.64
VCPKMT-205ENST00000569518 KLRC4O43908 158 aa25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 CD44P16070 742 aaKnown RBP25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 SEMA3FQ13275 785 aa25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 KCNB1Q14721 858 aa25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 CNKSR2Q8WXI2 1034 aa25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 UIMC1Q96RL1 719 aa25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 C7orf25Q9BPX7 421 aa25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 CTDP1Q9Y5B0 961 aaPredicted RBP25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 MYPNQ86TC9 1320 aa25.32■■□□□ 1.64
VCPKMT-205ENST00000569518 PPP1R3GB7ZBB8 358 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 CDC25BP30305 580 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 ZNF76P36508 570 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 TPM4P67936 248 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 ENOX1Q8TC92 643 aaKnown RBP25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 MRFAP1L1Q96HT8 127 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 CDK5RAP3Q96JB5 506 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 TRIM9Q9C026 710 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 HOMER2Q9NSB8 354 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 VAV3Q9UKW4 847 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 ZNF214Q9UL59 606 aaPredicted RBP25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 FRMPD4Q14CM0 1322 aa25.31■■□□□ 1.64
VCPKMT-205ENST00000569518 ATP2A1O14983 1001 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 NF2P35240 595 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 ECM1Q16610 540 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 RABGAP1Q9Y3P9 1069 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 STAT3P40763 770 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 UBXN2AP68543 259 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 CEP55Q53EZ4 464 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 ZNF658Q5TYW1 1059 aaPredicted RBP25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 KCNK18Q7Z418 384 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 SMYD4Q8IYR2 804 aaPredicted RBP25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 SYTL5Q8TDW5 730 aaPredicted RBP25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 RAD54LQ92698 747 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 TRERF1Q96PN7 1200 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 KDM3AQ9Y4C1 1321 aa25.3■■□□□ 1.64
VCPKMT-205ENST00000569518 A0A0G2JMZ2 1700 aa25.29■■□□□ 1.64
VCPKMT-205ENST00000569518 ANKRD13AQ8IZ07 590 aa25.29■■□□□ 1.64
VCPKMT-205ENST00000569518 LARP4BQ92615 738 aaKnown RBP25.29■■□□□ 1.64
VCPKMT-205ENST00000569518 CLMNQ96JQ2 1002 aa25.29■■□□□ 1.64
VCPKMT-205ENST00000569518 RIPK3Q9Y572 518 aa25.29■■□□□ 1.64
VCPKMT-205ENST00000569518 SPDYE16A6NNV3 312 aaPredicted RBP25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 MEIS1O00470 390 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 RHOBTB3O94955 611 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 CCT6AP40227 531 aaKnown RBP25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 AMPD3Q01432 767 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 PPATQ06203 517 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 EAPPQ56P03 285 aaPredicted RBP25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 PNMA8AQ86V59 439 aaPredicted RBP25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 NT5C3AQ9H0P0 336 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 PTMAP06454 111 aaKnown RBP25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 MCM6Q14566 821 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 TMEM132BQ14DG7 1078 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 KMT5BQ4FZB7 885 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 MOB2Q70IA6 237 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 SV2BQ7L1I2 683 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 ERO1BQ86YB8 467 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 SLC5A5Q92911 643 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 ELP3Q9H9T3 547 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 RNF146Q9NTX7 359 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 FANCLQ9NW38 375 aa25.28■■□□□ 1.64
VCPKMT-205ENST00000569518 SPDYE5A6NIY4 337 aa25.27■■□□□ 1.64
VCPKMT-205ENST00000569518 ATP1A3P13637 1013 aa25.27■■□□□ 1.64
VCPKMT-205ENST00000569518 RPS6P62753 249 aaKnown RBP25.27■■□□□ 1.64
VCPKMT-205ENST00000569518 TREML2Q5T2D2 321 aa25.27■■□□□ 1.64
VCPKMT-205ENST00000569518 CNNM4Q6P4Q7 775 aa25.27■■□□□ 1.64
VCPKMT-205ENST00000569518 SLC30A10Q6XR72 485 aa25.27■■□□□ 1.64
VCPKMT-205ENST00000569518 TRMT44Q8IYL2 757 aaKnown RBP25.27■■□□□ 1.64
VCPKMT-205ENST00000569518 HOXC10Q9NYD6 342 aa25.27■■□□□ 1.64
VCPKMT-205ENST00000569518 A0A0G2JLL6 359 aaPredicted RBP25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 SETQ01105 290 aaPredicted RBP25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 SNRNP48Q6IEG0 339 aaKnown RBP25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 PRRT2Q7Z6L0 340 aaPredicted RBP25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 IL31RAQ8NI17 732 aa25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 NFE2L3Q9Y4A8 694 aa25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 IRF6O14896 467 aa25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 PSMD10O75832 226 aa25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 ZNF18P17022 549 aa25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 HAUS3Q68CZ6 603 aa25.26■■□□□ 1.63
VCPKMT-205ENST00000569518 SYNRGQ9UMZ2 1314 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 MYMKA6NI61 221 aa25.25■■□□□ 1.63
VCPKMT-205ENST00000569518 MED24O75448 989 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms